Variovorax paradoxus S110: Vapar_1620
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Entry
Vapar_1620 CDS
T00916
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vap03032
]
Vapar_1620
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_1620
Enzymes [BR:
vap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Vapar_1620
DNA replication proteins [BR:
vap03032
]
Prokaryotic type
DNA Topoisomerases
Vapar_1620
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Vapar_1620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ACS18271
UniProt:
C5CTE6
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Position
1:complement(1749918..1752563)
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AA seq
881 aa
AA seq
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MTSFAKETLPISLEEEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVDFQDNYDGSEKEPKVLPSKLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLHLLRNPQATIDELMEIVPAPDFPTAGIIYGINGVRDGYRTGRGKV
VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLIEVFLQHRRE
VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRSWDSKLV
REMLTRSRADGGVVNADDYRPEGLEREFGMGSDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKEVMAEIDDLLDILAKPERVSVIIGEELGTIKQEFGQSKLGARRSLVEHSAYDL
STEDLITPTDMVVTLSHSGYIKSQPLNEYRAQKRGGRGKQATVTKEDDWIDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVALALTGEKRNFPADQ
YVFMATSMGTVKKTTLDEFSNPRKGGIIAVNLDEGDYLIGAALTDGKHDVMLFSDGGKAV
RFDEEDVRPLGRNARGVRGMSLDPGQGVIAMLVAEDEQQSVLTATENGYGKRTSITEYTR
HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVAEIRELGRATQGVT
LIGLDEGAKLSGLQRIVENDANGESEPGADDTSSSSTENPQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttcgccaaagaaaccctgcccatcagtctcgaagaggaaatgcgcagcagc
tatctcgattacgccatgagcgtgatcgtgggccgggcgcttcccgatgcgcgcgacggc
ctcaagcccgtgcaccggcgcgtgctgtatgccatgcacgagctcaacaacgactggaac
cgggcgtacaagaagtccgcccgcatcgtgggcgacgtgatcggcaagtaccacccgcac
ggcgaccagtcggtctacgacaccatcgtgcggctggcgcaggacttttccatgcgccat
atgctggtcgacggccagggcaacttcgggtcggtcgacggcgacaacgcggctgcaatg
cggtatacggaaatccgcctcgccaaaattgcgcacgaaatgctggccgatatcgacaag
gaaactgtcgatttccaggacaattacgacggctccgaaaaagaaccaaaggtccttccg
agcaaactgccgaatttgctggtgaatggttccggcggtattgcggtgggcatggccacc
aatattccgccgcacaatctcaatgaggtggtggacgcctgcctgcatctgctgcgcaat
ccgcaggccaccatcgacgagctgatggaaatcgtgccggcgccggacttccccaccgcc
ggcatcatctacggcatcaatggcgtgcgcgacggctaccgcaccggccgcggcaaggtc
gtgatgcgcgccaagtgccacttcgaggacatcgaccgcggccagcgccaggcgatcatc
gtcgacgagctcccctaccaggtcaacaagaagacgctgcaggagcgcatggccgagctg
gtgcacgagaagaagatcgaaggcatcagccacatccaggacgagtccgacaagtcgggc
atgcgcctggtgatcgagctcaagcgcggcgaagtgcccgaggtggtgctcaacaacctg
tacaagcagacccagctgcaggacaccttcggcatcaacatggtggcgctggtcgacggc
cagcccaagctgtgcaacctgaaggacctgatcgaggtcttcctgcagcaccgccgcgaa
gtggtcacgcgccgcaccgtcttcacgctgcgcaaggcgcgcgaacgcggccacgtgctc
gaaggcctggcggtggccctggccaacatcgacgaattcatccgcatcatccgcgagtcg
cctaccccgccggttgccaaggccgagctcatgacccgcagctgggacagcaagctggtg
cgcgagatgctgacgcgctcgcgcgcagacggcggcgtggtcaatgccgacgactaccgc
cccgagggcctggagcgcgagttcggcatgggctcggacggcctctaccgcctgtcggaa
acccaggcccaggaaatcctgcagatgcgcctgcagcgcctgaccggcctcgagcaggac
aagatcgttgccgagtacaaggaggtcatggccgagatcgacgacctgctcgacatcctg
gccaagccggagcgcgtctcggtcatcattggcgaggaactcggcaccatcaagcaggag
ttcggccagtccaagctcggcgcgcgccgcagcctggtggagcacagcgcctacgacctc
tcgaccgaagacctgatcacgcccaccgacatggtggtgacgctttcgcacagcggctac
atcaagagccagccgctgaacgaataccgcgcgcaaaagcgcggcgggcgcggcaagcag
gccaccgtcaccaaggaagacgactggatcgaccagctcttcatcgccaacacgcacgac
tacatcctgtgcttctccaaccgcggccggctgtactggctcaaggtgtgggaagtgccg
gcgggttcgcgcggctcgcgcgggcgccccatcgtcaacatgttcccgctgcaggaaggc
gagaagatcaacgtggcgctcgcgctgaccggcgagaagcgcaacttcccggccgaccag
tacgtgttcatggccacctccatgggcacggtcaagaagaccacgctcgacgaattcagc
aacccgcgcaagggcggcatcattgccgtgaacctcgacgagggcgactacctcatcggc
gccgccctgaccgacggcaagcacgacgtgatgctgttcagcgacggcggcaaggccgtg
cgcttcgacgaggaagacgtgcgcccgctcggccgcaatgcacgcggcgtgcgcggcatg
tcgctcgatccgggacagggcgtgatcgccatgctggtggccgaggacgagcagcaaagc
gtgctcaccgccaccgaaaatggttacggaaagcgcacaagcattaccgagtacacgcgt
catggccgcggaaccaaaggcatgattgcgattcaacagagtgagcgcaacggcaaggtc
gttgccgccaccctcgtgcatgcggacgatgagatcatgctcatcaccgacaagggcgtg
ctcgtgcgcacccgggtagccgagattcgtgaactgggtcgcgcaacgcaaggcgttacg
ctgatcgggctcgacgaaggcgccaaactcagcgggctacaacgtatcgtcgaaaacgac
gccaacggcgagagtgagcctggcgcagacgatacttcctcatcttcaacggagaatcct
cagtga
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