Variovorax paradoxus S110: Vapar_1978
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Entry
Vapar_1978 CDS
T00916
Name
(GenBank) 1,4-alpha-glucan branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00500
Starch and sucrose metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
Module
vap_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
vap_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Vapar_1978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vap04147
]
Vapar_1978
Enzymes [BR:
vap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Vapar_1978
Exosome [BR:
vap04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Vapar_1978
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-ProteinID:
ACS18624
UniProt:
C5CVH5
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All DBs
Position
1:2115412..2117310
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AA seq
632 aa
AA seq
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MPVTQLLSEPEAQDAYLFREGTHSRLYDLLGCHLLKEGGARFAVWAPNAESVAVVGDWNH
WSGDADPLAPSADGTGIWLGRAPHAAPGQAYKYRIRSRFGGYTVDKADPFAFCAELAPAT
ASRICELSYEWNDAEWMATRGARNALDAPMSVYEVHLGSWRRREGRFMGYREIAHELAAY
VKEMGFTHVELMPVTEHPFYGSWGYQTTGYFAPTARYGSPQDFMYLVDHLHQNGIGVLLD
WVPSHFPTDEHGLAFFDGTHLYEHADPRQGFHPEWNSSIFNYGRAEVRSFLVSSGLFWLD
RYHVDGLRVDAVASMLYLDYARKHGEWIPNRHGGRENLEAIDFLRTLNRAVYREHPDAIT
VAEESTAWPRVSRPTDMDGLGFGEKWNMGWMHDVLAYMKEEPIHRKYHHHKMTFSLVYAF
HENFVLPLSHDEVVHGKGSLLGKMPGDHWQQFANLRALFGFMWAHPGKKLIFMGGEFGQR
REWTHDGELEWWVCELEGHGGLQRLVAQLNRVYRDAPALYQQDFSAAGFEWVAADDTDAS
VFAFLRKPRDGHAPLLVVSNMTPVPRTNYLLGVPLPGFWSELINTDAVEFGGSGWGNLGG
VEAAPVRSHGRMHSVCMTLPPLSTLILEHRPS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
gtgccagtgacccaactgctttcagagcctgaggcgcaagacgcctacctgttccgcgaa
ggaacgcattcccgcctgtacgacctcctgggttgccatcttctgaaggagggcggcgcg
cgcttcgcggtgtgggcgcccaacgcggaatcggtggcggtggtcggcgactggaaccac
tggtccggcgatgccgatccgctggcgccgtccgcggacggcaccggcatctggctgggc
cgcgcgccccatgccgcgccggggcaggcctacaagtaccgcatccgctcgcgctttggc
ggctacacggtcgacaaggccgatccgttcgcgttctgcgccgagctggcgcccgccacg
gcctcgcgcatctgcgaactttcctatgaatggaacgacgccgaatggatggccacgcgg
ggcgcgcgcaatgcgctcgatgcgccgatgtccgtctacgaggtgcacctgggctcgtgg
cgccgccgcgagggccggttcatgggctaccgcgagatcgcgcacgaactcgcggcctac
gtgaaggagatgggcttcacgcacgtggagctcatgccggtgacggagcaccccttctac
ggctcctggggctaccagaccaccggctacttcgcgcccacggcgcgctacggctcgccg
caggacttcatgtacctggtcgatcacctgcaccagaacggcatcggcgtgctgctggac
tgggtgccttcgcactttccgaccgacgagcacggcctcgcgttcttcgacggcacgcac
ctctacgagcatgccgatccgcgccagggcttccacccggagtggaactccagcatcttc
aactacggccgtgcggaggtgcgcagcttcctggtgtcgtcgggcctgttctggctcgac
aggtaccacgtcgatgggctgcgggtcgatgcggtcgcctccatgctctacctggactac
gcgcgcaagcacggcgaatggattcccaaccgccatggcggccgcgagaacctggaggcc
atcgatttcctgcgcaccctgaaccgcgccgtctaccgcgagcaccccgacgcgatcacc
gtggccgaggaatccacggcctggccgcgcgtctcgcggccgaccgacatggacgggctg
ggctttggcgagaaatggaacatgggctggatgcacgacgtgctcgcctacatgaaggaa
gagccgatccaccgcaagtaccaccaccacaagatgacgttctcgctggtgtatgccttc
cacgagaacttcgtgctgccgctgtcgcacgacgaggtggtgcacggcaagggctcgctg
ctcggcaagatgccgggcgaccactggcagcagttcgccaacctgcgcgcgctgttcggc
ttcatgtgggcgcacccgggcaagaagctgatcttcatggggggcgagttcggccagcgg
cgcgagtggacgcacgacggcgagctcgaatggtgggtctgcgagctcgaagggcatggc
ggcctgcagcggctggtggcgcagctcaaccgcgtgtaccgcgatgcgcccgcgctctac
cagcaggatttctcggccgcgggcttcgaatgggtcgcggccgacgataccgacgccagc
gtgttcgccttcctgcgcaagccgcgcgacggccatgcgccgctgctggtggtcagcaac
atgacgccggtgccgcgcaccaactacctgctgggcgtgccgctgccgggcttctggagc
gagctcatcaacaccgacgccgtcgagttcggcggctccgggtggggcaaccttggcggc
gtcgaggccgcacccgtgcgttcgcatggccgcatgcactcggtgtgcatgaccctgccg
ccgctgtccacgctgattctcgagcaccggccatcatga
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