Variovorax paradoxus S110: Vapar_1979
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Entry
Vapar_1979 CDS
T00916
Name
(GenBank) alpha amylase catalytic region
KO
K16147
starch synthase (maltosyl-transferring) [EC:
2.4.99.16
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00500
Starch and sucrose metabolism
vap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Vapar_1979
Enzymes [BR:
vap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.16 starch synthase (maltosyl-transferring)
Vapar_1979
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GlgE_dom_N_S
GLGE_C
Alpha-amylase
Malt_amylase_C
GHL6
Motif
Other DBs
NCBI-ProteinID:
ACS18625
UniProt:
C5CVH6
LinkDB
All DBs
Position
1:2117307..2119361
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AA seq
684 aa
AA seq
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MKKLFANPQAPAASSVAPEVQDGNRRAVVDAVLPSVDNGRFAVKCIVGERVQVKAHCFTD
GHDVLRVLLCWRPQGKAEFREVPMKPLVNDVWEASFAPPALGRYFYTVVAWVDPFESWRH
EMTRRVDPDDVRIASQVGALEVAGAAERAEGADRQALANWATELDAVAADPGADVSALKA
LALDEELAMLARRHPDRRHEVRYSLELPLEAERERARFSTWYELFPRSAGTTPGVHGTFK
DVEARLPAIAAMGFDVLYFPPIHPIGRLQRKGPNNALASGADDVGSPWAIGAAEGGHKAI
LPALGTAEDFRHLCAEAASHGLEIALDIAFQCAPDHPYVKAHPDWFRWRPDGSVQYAENP
PKKYQDIYPFNFESEDWRGLWAELRSVIEHWIGEGVRIFRVDNPHTKAFAFWEWVIGEIR
RQHPEVIFLAEAFTRPKVMHRLAKLGFSQSYTYFTWRNTKQELVEYFTELSTPPGVDYFR
PNVWPNTPDILHEQLQGGEASVYMARLVLAATLAANYGIYGPAYELREHRPRSSGSEEYL
DSEKYQLRHWNHDDPGSLAPFITRVNRIRRENPALHRDRGLRFLRIDNDQLLAYAKVSEA
GDNVVVTVVNLDPHNVQSGWLELDPESVNVERSRPFQMHDLLSGQRFIWQGGWHYVKLDP
HSVPAHIFVVRRRHGDERDFDYFL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgttcgcaaatccgcaggctcccgcggcttcctccgtggcgcccgaggtg
caggacggcaaccggcgcgcggtcgtcgatgccgtgctgccgtcggtggacaacggccgc
ttcgccgtgaaatgcatcgtcggcgaaagggtgcaggtgaaggcgcactgcttcaccgac
ggccacgatgtgctgcgcgtgctgctgtgctggcgtccgcagggcaaggccgagttccgc
gaagtgccgatgaagccgctggtcaacgacgtgtgggaggcatcctttgcgccgcccgcg
ctcgggcgctacttctacaccgtggtggcctgggtcgacccgttcgaatcgtggcgccat
gaaatgacgcgccgcgtggaccccgacgacgtgcgcatcgcgtcgcaggtgggcgcgctg
gaagtggccggcgcggccgagcgggccgagggcgcggaccggcaggcgctggccaactgg
gccaccgagctcgatgccgtggcggccgaccccggcgcggacgtgtcggcgctcaaggcg
ctggcgctggacgaagagctcgccatgctggcgcgccgccatcccgaccgccggcacgag
gtgcgctattcgctcgaactgccgctggaagccgagcgcgagcgtgcgcgcttcagcacc
tggtacgagctgttcccgcgctcggccggcacaacgcccggcgtgcacggcaccttcaag
gacgtggaggcgcggctgcccgccattgccgccatgggcttcgacgtgctgtactttccg
ccgatccacccgatcggccggctgcagcgcaagggccccaacaacgcgctggccagcggc
gcggacgacgtcggcagcccctgggccattggcgcggccgagggcggccacaaggccatt
cttccggcgcttggcacggcggaagactttcgccacctctgcgcagaggccgcctcgcac
ggcctggagatcgcgctggacatcgccttccagtgcgcccccgaccatccctatgtgaag
gcgcaccccgactggttccgctggcgccccgacggcagcgtgcagtacgcggagaacccg
cccaagaagtaccaggacatctaccccttcaactttgagagcgaggactggcgcggcctg
tgggctgagctgcgcagcgtgatcgagcactggataggcgagggcgtgcgcatcttccgc
gtcgacaacccgcacaccaaggccttcgcgttctgggaatgggtgatcggcgagatccgg
cgccagcacccggaagtgatcttcctggccgaggccttcacgcggcccaaggtgatgcac
cggctcgcgaagctgggcttctcgcagtcctacacctacttcacctggcgcaacaccaag
caggaactggtcgagtacttcaccgagctttccacgccgccgggcgtggactacttcagg
cccaacgtgtggcccaacacgcccgacatcctgcacgagcagctgcagggcggcgaagcc
tcggtctacatggcgcggctggtgctggccgccacgctcgcggccaactacggcatctac
gggccggcctacgagctgcgcgaacaccggccgcgctcgtccggcagcgaggaatacctc
gactccgaaaaataccagctgcgccactggaaccacgacgacccgggcagcctggcgccg
ttcatcacgcgcgtgaaccgcatccgccgcgagaacccggcgctgcaccgggaccgcggc
ctgcgcttcctgcgcatcgacaacgaccagctgctggcctatgccaaggtgtcggaggcc
ggcgacaacgtggtcgtgaccgtggtcaacctcgatccgcacaacgtacagtcgggctgg
ctcgagctcgaccccgaaagcgtgaacgtcgagcgttcgcgcccgttccagatgcacgac
ctgctgagcgggcagcgcttcatctggcagggcggctggcactacgtcaagctcgatccg
cacagcgtgcccgcgcacatcttcgtggtgcggcggcgccatggcgacgagcgcgacttc
gactacttcctgtga
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