KEGG   Variovorax paradoxus S110: Vapar_3889
Entry
Vapar_3889        CDS       T00916                                 
Name
(GenBank) transcriptional regulator, LysR family
  KO
K18297  LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
Organism
vap  Variovorax paradoxus S110
Module
vap_M00745  Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vap03000]
    Vapar_3889
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:vap01504]
    Vapar_3889
Transcription factors [BR:vap03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    Vapar_3889
Antimicrobial resistance genes [BR:vap01504]
 Gene sets
  beta-Lactam resistance modules
   Imipenem resistance, repression of porin OprD [MD:M00745]
    Vapar_3889
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexEF-OprN [MD:M00641]
    Vapar_3889
SSDB
Motif
Pfam: HTH_1 LysR_substrate HTH_30 HTH_5
Other DBs
NCBI-ProteinID: ACS20503
UniProt: C5CV67
LinkDB
Position
1:complement(4120644..4121546)
AA seq 300 aa
MKPIELSRIDLNLLTVLAALMRERHVSRAAQRLHLGQPAVSHALARLRELTGDPLLVRQG
RVMEPTERALALMQGLGPALEQIEATFRAQADFEPARAAPVFRIGLTDDLQIAMLPRLLR
ALSVEAPRARLVTLTVCYRNAARYLDEGQVSAVMTFLKDLPAGAKIRKVRTARFALLRAD
TAAARLTLDDYCRRRHVLVTYAGDLCGTVDETLNELGRQREVAFSVPQFGSLPAVLAGTE
LLATVPEHVALALSAQGGLRCEALPFESPSYQIKLAWRAVTDKDAAETWLRRAMLRAFND
NT seq 903 nt   +upstreamnt  +downstreamnt
atgaaaccgatcgaactcagccggattgacctcaacctgctcaccgtgctggcggccctc
atgcgcgagcggcacgtcagccgggctgcgcagcggctgcacctgggacagccggccgtg
agccacgcgctggcgcggctgcgcgagctcacgggcgatccgctgctggtgcgccagggg
cgggtgatggagccgaccgaacgggcactggcgctgatgcagggactgggtccggcgctc
gagcagatcgaggccacgttccgcgcgcaggcggatttcgagcccgcgcgcgccgcgccg
gtgtttcgcatcgggctcaccgacgacctgcagatcgcgatgctgccgcggctgcttcgc
gcgctcagcgtggaagcaccccgcgccaggctggtgaccctgacggtctgctaccgcaac
gccgcgcgctatctcgacgaagggcaggtcagcgcggtcatgaccttcctgaaggatctg
ccggcgggtgccaagatacgcaaggtccgcacggcacgctttgcgctgctgcgcgccgac
accgcggccgcaagactgacgctcgacgactattgccggcggcggcacgtgctcgtgacc
tacgcgggcgacctgtgcggcaccgtcgacgagacactgaacgaactcggccggcagcgc
gaggtggccttctcggtgccgcagttcggcagcctgccggccgtgctcgcgggcaccgag
ctcctggccacggtgccggagcatgtggcgctggcgctgtcggcgcagggcgggcttcgc
tgcgaggcgctgccgttcgagagtccgagctaccagatcaagctggcctggcgcgccgtg
accgacaaggacgcggcggagacatggctgcgcagggcgatgctgcgggcgttcaacgac
tga

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