Vibrio aquimaris: FIV01_12865
Help
Entry
FIV01_12865 CDS
T06969
Symbol
lgrD1
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
vaq
Vibrio aquimaris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
AMP-binding_C
PP-binding
Motif
Other DBs
NCBI-ProteinID:
QFT27309
UniProt:
A0A5P9CLY6
LinkDB
All DBs
Position
complement(2760463..2763528)
Genome browser
AA seq
1021 aa
AA seq
DB search
MSSVHQSRLLQSLKSMAVRHCQKTALIYQDQEVTYAELYALAEVYQQRIHRCSPSCDYVY
LYLDKGIELIAAILAVIQSGRTFIPVDANTPPRRLNQILDDVACACVLTEKHLASNIDSK
IPYDCLDEATGGKHTSLPGKFVTDRSSCYAIYTSGSTGRPKGAIISHQALLNVIEQSISE
MAISSDSKILQFSSIGFDVSLWEIFTSLLSGSTLVIATNAQRYDLDALQILIHDEAVDTA
FFMSTFLTHLQPRQFPTIKTVVTGGEMFGEKIVAQWADGKALYYVYGPTECAIFQSIVPC
EKNVPAVPTVGHPIANMHFHLYEVVGSEGDVFELGISGIGVGYGYLNRKTLTKEKFVQDH
QAGVIYLTGDLVKRRPDGELDFYGRKDRQIKINGYRVEIGEIENTILRQQGVESCCVVVV
ELAQSKQLFAYVSSLPSSDVNEAWLLDSLRASLPGYMIPDHIRLIDCLPKNQNGKIDRKL
LKEQASESLNNHSAPSSEELTEHEAKLAEYWKKLLKIDAVGQEDDFFLLGGTSALAIRLV
AELADYALKFSDILELRTLVKVAAKMTPVTSVTEEAAVVNVQNGKTKATHTQTSIWFASL
SSERSDIYDLRYAYQISGNIDCALLMKTLTTLLHKHESLRTSLRLEREQILLEVGNADKI
IRQHDLSLETPEIVQQRVGEALSQPLDIESGTFSAVDVFDAGSEIFLILKVHHTVYDGWS
HDVFLKDLESIYFGYCYGYTSTDIEEALPIKDIYQPKVVTNNERQASWLYWRQMLSHDAV
ATVPVCAERNLVPSGDGGQSVRKLDDRLASLLRKFALDNKQTLFVVLASLVQLVIRSYSD
NEQVRLGTVRANREQKTRLDQIGLYAETFLINNTINEKSCLSHIVDGCERSLIESTRYDS
ISYLELVSQFPSAAIHYWVTVVEAEFEPFHEDTSIQWEKLPLEEETNLFDLSFIFELENN
DIYLKLVFAGDLYSEVKIDELLDRFESIATCFLKDPETSFSTLSDSLMLSNRKTFLQERF
N
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagttcatcaaagtcgtctacttcaatctctgaaaagtatggcggtcaggcat
tgtcagaaaacagcgctcatttaccaggatcaagaggtgacgtatgctgaattgtatgct
ctggcagaagtatatcaacaacggattcatcgctgctctcccagttgtgattatgtctat
ctgtatctggataaaggcattgaactgattgctgcaatcctcgctgtgattcaatcaggc
cggacatttatcccagtggacgctaatacaccaccgcgtaggctgaatcagattctggat
gatgttgcgtgtgcttgtgtactgactgaaaaacacttggcatctaatattgatagtaag
atcccttatgactgtcttgatgaggcaacaggaggaaaacatacatctctaccgggtaaa
tttgtaacagaccgttcaagttgttatgccatttatacgtcaggcagtactggccgtccc
aaaggggcgattatctctcatcaggcattactgaatgtgattgagcagtcgatttctgaa
atggcgatatcgagcgatagtaagattctgcagttctcctcgattggatttgatgtatcg
ttatgggagattttcacgtcactgctgagtggcagtacccttgtgattgcgaccaatgct
cagcgttatgatttggatgccctccaaattctgattcatgatgaggcggtggatacggcc
tttttcatgtcgactttcttaactcatctacagcctaggcaatttccaacgattaaaacg
gtggtgactggcggagaaatgtttggtgaaaagattgtggcgcagtgggcagacggtaag
gcgctgtactacgtgtatggccccactgaatgtgccattttccagtctattgtgccatgc
gagaaaaatgttcctgctgtacctacggttggtcatcctattgccaacatgcattttcat
ctatacgaggttgtcgggagcgagggagatgtattcgagctagggatctcggggattgga
gtcggatacggctatttgaaccgaaaaacattgacgaaagagaaatttgttcaggatcat
caggctggcgtgatttatctgacgggtgatttggtcaaaagacgtccggatggtgaactc
gatttctatgggagaaaagacaggcagatcaaaataaacggttatcgggtcgaaatcggt
gaaattgaaaataccattctccgccaacagggtgtggaatcgtgctgtgttgttgttgtt
gagttagcacagtctaaacagctgttcgcctatgtttcatcgttaccgagctcagacgtg
aatgaagcttggctactggattcattaagagcatcattgcccggatatatgatccccgat
catattaggttgatcgactgtctgcctaaaaatcagaacggcaagattgacagaaagcta
ctcaaagaacaggctagtgaatcgctgaataatcactctgcccctagttcagaagaactg
actgaacacgaagccaaattggcggaatactggaagaaactgctgaagattgacgccgtt
ggtcaggaggatgatttctttctgctgggaggtaccagtgcattagccattcggttggtt
gcggaacttgccgattatgctctgaagttttcagacattttagaactgcgcaccttggtc
aaagtggcggcgaaaatgacacccgttacctcagttactgaggaagcagcggtggtgaat
gtgcaaaacggaaagaccaaagcgacccatacacagacaagcatctggtttgccagcttg
agtagcgaacgtagcgatatttatgatctcagatacgcttaccagattagcggcaatatc
gattgcgcgctcctgatgaaaaccctgacaactctattacataagcatgagtctttgaga
acttccttacggcttgagagggaacagatcctcctcgaagtcggtaatgcggataaaatt
attcgacagcacgatctgtctcttgaaactcctgaaattgtgcagcagcgagtcggagaa
gctctaagtcaaccgcttgatattgaaagcggcaccttttctgcggttgatgtgtttgac
gctggcagcgagattttccttattctgaaagtgcatcacactgtctatgacggttggtca
cacgacgtttttctgaaggatctggagtctatttactttggttattgttatggatataca
tcaacagatattgaagaagcgttgcctattaaggatatctatcaaccgaaggtagtcacg
aataatgaaagacaggcttcttggctctattggcgtcaaatgttaagccatgatgcggtg
gcaactgtgcccgtctgtgctgagagaaatttagtcccaagcggcgatggtggtcaaagt
gtccgtaaacttgacgacaggttagcttcattactgcgtaagtttgctttggacaataaa
cagaccctttttgtagtacttgcatctttggtgcaattagtaatccggagttacagcgac
aatgagcaggttcgtttagggacggttagggcaaatcgcgaacagaagacgcggcttgat
cagattggtttgtacgctgagacatttttaattaataacactatcaatgaaaaaagttgc
ctgagtcatatagtcgatgggtgtgaacggagcttgattgaatccacaagatacgacagc
atttcgtatcttgagctggtttctcagtttccgtctgccgccatccactactgggtgact
gtcgttgaagccgaatttgaaccctttcatgaagatacctcaatccaatgggagaagctg
cctcttgaagaagaaacaaatctgtttgatttgagttttatttttgagctcgagaacaac
gatatttatttgaaattagtgtttgctggagatttgtactccgaagtcaaaatcgacgaa
ttattagatcgatttgaatcgatagctacatgtttccttaaagacccagaaaccagtttt
tcgacattatctgacagcttgatgctttccaacagaaagacatttttacaagagcgattt
aactag
DBGET
integrated database retrieval system
