KEGG   Vigna angularis (adzuki bean): 108331720Help
Entry
108331720         CDS       T04660                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
var  Vigna angularis (adzuki bean)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:var00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    108331720
Enzymes [BR:var01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     108331720
DNA repair and recombination proteins [BR:var03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     108331720
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
4
AA seq 1168 aa AA seqDB search
MATEQTKFSVLCSLFTWTQRSKSAAKKRSKFRKFLDAFCIDRNFFPAIRLILPNLDRERG
SYGLKESVLATSLIDALGISRDSPDALRLINWRKGGAATGATAGNFALVATEVLHRRQGT
ASGGLTIRELNELLDRLASGENRAEKILVLSTLIQKTNAQEMKWIIMIILKDLKLGISEK
SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANATEAW
KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFIDHSEYAHAMSDIIIQNILVDRCIL
DGEMLVWDKSSKRFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYFGDTSVIHQSLKER
HEILCKVVRPMKGRLEVLVPNAGINSHLTSGEPCWSFIAHKVDEVERFFKETIENRDEGI
VLKDHSSKWEPSDRSGKWLKLKPEYIQAGSDLDVLIIGGYYGSGRRGGQVAQFLVGLAER
QSPNAQPMRFISFCRVGTGLSDEELDVVITKLKPYFRKYEYPKKRPPSFYQVTNHSKERP
DVWVDSPEKSIILSITSDIRTIESEVFAAPYSLRFPRIDRVRYDKAWNECLDVQSFIELV
HSSNGTTQRDTEYGSKQDSKPKRMKSSTRGEKKNMSIVPSHLIQTDISSIKGGSLILSNM
MFYFANVPSSHSLESLHKIVAENGGTFSMNLNNSVTHCVAADSKGFKFEAAKRHGDIIHY
SWVLDCYEQKKLVCLQPKYFLFLSELTKKKFREEIDEFSDSFYMDLDLGDIKQLLSNISK
SEDVSTVDHYRKKYCPKDKWSFFCGCSIYFHTATPSSKGDWHYILQLALRRFKLEVLMGG
GKVTSNLTSATHLVAFLVPGCLTDFEQILSSFTSVERKILRSKRLYIVNSQWLEDCSDSS
QRLPEDSYSLKPWGIEETTAEDCGLDLALEAHQCGDNTQHQNTSFSDKGNRKRSEQVACE
DSMAFLSREKGIKRKRGRPVGSGIKNVKPTGKQTRRARPQNVKKPTKIWEYESSDESDSR
DKQEIDTRAGSLNFYKKHSEPQENEERENVQVSRTVESSEQNKVDNKLEDLKDNDHERML
IPEIEMTDRYNDQKNEVVEKLDFSADPLQAMLFDMIPTLGTQKVEQPMNLSVREEKLAET
SNAETEPITTKKNKVSFMDAANELLKDW
NT seq 3507 nt NT seq  +upstreamnt  +downstreamnt
atggcgacggagcaaaccaaattcagcgtgttgtgcagcctcttcacgtggacgcagcgg
agcaagtcggcggcgaagaagcgctccaagttccgcaagttcctcgacgccttctgcatt
gaccgcaacttcttccccgctattcgcctcattctccccaacctcgatcgcgagcgcggc
tcctatggcctcaaggagtccgttctcgccacctccctcatcgacgccctcggcatctcc
cgtgactcccccgatgccctccgactcatcaattggcgtaagggtggcgccgccaccggc
gctacagcaggaaatttcgccctcgtcgccaccgaggtgctgcaccgcaggcaagggacc
gcttcaggagggttgacgataagggagttgaatgagttgcttgaccggttggcttccggt
gaaaacagggctgagaaaattttggttctttctacccttatccaaaagacaaatgcacag
gaaatgaagtggattatcatgataatcctgaaagatctaaagctgggaattagtgaaaaa
agcatttttcatgagttccatcctgatgcagaagacttgtttaatgttacctgtgactta
aaactagtatgtgaaaagctaagggatcggaatcagcggcataaacggcaggatattgaa
gttgggaaagctgtccgcccccaattagctaagagagttgctaatgcaactgaagcatgg
aagaagcttcatgggaaggaagtggttgttgagtgcaaatttgatggcgaccgaattcaa
attcataaaaacggaactgagatacattttttctcaaggaactttatagatcattctgaa
tatgcacatgcaatgtcagatatcataatacaaaacattcttgtagataggtgtatcctt
gatggtgaaatgttggtgtgggacaaatcctcaaaacgctttgctgagtttggctcaaat
caggaaatagccaaggcagcaagagatggacttgatagtgacagacagttatgctatgtt
gcgtttgatatcctttattttggagatactagtgtgattcaccaatctttgaaggaaaga
catgagattttatgtaaagttgttaggccaatgaagggacggttggaagttttggtgcct
aatgctggtatcaacagtcatcttacttcaggtgaaccttgttggtcatttattgctcat
aaagttgatgaagttgagaggtttttcaaggaaaccattgaaaatagagatgagggaatt
gttttaaaagaccacagctctaaatgggaacctagtgatcgtagtggaaagtggctaaaa
ttgaagcctgaatacattcaagctggctctgatttggatgtacttatcataggtggctac
tatggttctggacgacgcggaggacaggttgctcaattcttggttggccttgcagaacgt
caatcaccaaatgcacaacctatgcggtttatatccttttgcagagttggcactggactc
tctgatgaggagcttgatgttgtaataaccaaattaaaaccatacttcagaaagtatgaa
tatccaaagaagaggccaccaagtttttatcaagtaactaatcattcaaaagaaagacct
gatgtgtgggttgatagccctgagaaatcaattattctgtctattaccagtgatatccga
actatagaatctgaggtatttgctgcaccttacagcctgagatttcctaggattgacagg
gtgagatatgacaaagcttggaacgaatgccttgatgttcaatcatttatagaactagtg
cattctagcaatggtaccacacagagggatacagaatatggcagcaaacaggacagtaaa
ccaaaaagaatgaaatcctccactaggggagaaaagaaaaacatgtccatcgttccttct
catttaattcaaactgatatttccagcattaaggggggctccttaatattgtcaaatatg
atgttctactttgctaatgtgccttcatcgcattctcttgagtccttgcacaaaatagtt
gctgagaatgggggaactttttcaatgaatttgaacaactcagtcacacattgtgttgcc
gcagacagcaagggctttaaatttgaagcagcaaagcgtcatggtgatatcattcattat
tcttgggtactagactgttatgagcaaaaaaagcttgtctgcttacagcccaagtacttc
cttttcctatctgaactgacaaagaagaagttccgagaagaaattgatgagttctcagac
tctttctacatggacctagatcttggagacatcaagcagctcttaagcaatattagtaag
tctgaagatgtcagcactgtcgatcattacaggaaaaaatactgcccaaaggataagtgg
tctttcttttgtggatgttcaatttatttccacactgcaacaccttcatcgaaaggagat
tggcattatatattacaacttgctttgaggagattcaagcttgaggttctcatgggtggt
ggaaaagttacctctaatcttacttctgcaacccatttagtggcctttcttgtgccagga
tgtctgactgactttgaacaaatactgagtagtttcacttcagtagaaaggaaaattctc
cgaagcaagaggttgtatatagttaattcccagtggttggaagattgttcagacagtagc
caaagattaccagaagactcttacagtttgaagccctggggaatagaagagacaactgct
gaagattgtggactggacttggcgttagaggctcatcagtgtggagataacacacaacac
caaaatacatctttctctgacaagggaaatcggaaaagaagtgaacaagttgcatgcgaa
gacagtatggccttcttatcccgagagaagggtatcaaaaggaaaagaggaagacctgtg
ggcagtggcataaaaaatgtaaaaccaactggcaaacaaactcgaagagcacgaccacaa
aatgtgaaaaagcctactaaaatatgggaatacgaatcatcggatgaaagcgattctcgt
gacaagcaggagattgacaccagagcaggaagtcttaacttttataagaaacattcagaa
ccccaggagaatgaggaacgggaaaatgtccaagtttctaggacagtggaaagttctgaa
caaaataaggtagacaacaagctggaggacttgaaggacaatgatcatgaaagaatgttg
attcctgaaatagaaatgactgataggtacaatgaccaaaagaatgaggtggtagagaaa
ttagacttttctgctgacccccttcaggcgatgttatttgacatgattcctactcttggc
acccaaaaagttgagcaacctatgaatcttagtgttagagaagagaaactagcagaaacc
tccaatgcagaaacagagcctataactacaaagaaaaacaaggttagcttcatggatgct
gccaatgagctgctgaaggactggtag

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