Vigna angularis (adzuki bean): 108336081
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Entry
108336081 CDS
T04660
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108336081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108336081
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
108336081
Prokaryotic type
Archaeal type
TFB
108336081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
TF_Zn_Ribbon
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
108336081
NCBI-ProteinID:
XP_017427888
LinkDB
All DBs
Position
6:4169987..4172399
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AA seq
495 aa
AA seq
DB search
MKCPYCSAAQGRCATTSSGRSITECTSCGRVMEERQSHPHHVFHMRAQDNPLCLVTSDLP
LPLNQNEDEDPFEPTGFITAFSTWSLEPSPLYLQSSLSFSGHLAELERTLESSSSSSSSS
SSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQ
AIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQL
NKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVT
LRKVYKELLENWDDLLPSNYTPAVPPERAFPTTIIASGRSSTVKADAVEAISSLDSEKLT
DIKPSKPNEVSGLVHQPKGKDEAEGKSNAHGSHSTLNQQSTFWQSQLPCGTNNHQNVLQG
MDIDVSQRSHQQPEHMAEDTNGSANGNALKSSQLCSPPASSASSVMRPFSAPPSAGPSNV
RLGQSPKIMPGFPEH
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccgtactgctcggcggcgcagggccgctgtgcgacgacgagcagcgggcgt
tcgatcacggagtgcacgtcttgcgggcgcgtgatggaggagcggcagtcgcatcctcac
cacgtgttccacatgcgcgcccaagacaaccctctgtgtctggttacatcggatctccct
cttcctctcaatcagaacgaggacgaggaccctttcgagcccacgggcttcatcactgcc
ttctccacgtggtccctggagcccagcccactttaccttcagtcctccctctccttctcc
ggccacctcgccgagcttgaacgcactctggaatcctcctcttcctcttcctcttcttct
tcgtcaacggttgtggttgataatctgagggcctacatgcagattatcgatgtggcgtca
attctagggttggactgcgacatttccgaccacgcttttcagttgttcagggattgttgc
tccgctacgtgtttgagaaaccggagtgtggaggcgcttgctactgccgctcttgttcag
gccatcagagaggcccaggaacccagaacccttcaggaaatttcaattgcagccaatgta
cagcaaaaggaaattgggaaatatattaagatactgggagaggctttgcagctaagtcaa
cctattaacagcaattccatttcagttcatatgccaagattttgcacgcttcttcagctc
aataaatctgcccaggaactggctactcacattggagaggtcgtgatcaacaaatgcttc
tgtactcgcaggaatcctattagcatctcagctgctgctatatatttggcttgccaactt
gaagacaagcgcaaaacccaggcagaaatttgtaaggtgactggtcttactgaagtcact
ctccgtaaagtgtacaaggaactattggaaaattgggatgatttgcttccctctaattac
accccagctgttcctccagagagggcatttcccacaacgataattgcttctggccgttct
tcaacagttaaggctgatgctgtagaggctatttcttctttggactcagaaaagttgacg
gatattaaacctagcaaacccaatgaggtctcaggcctagttcatcagcccaaagggaag
gatgaggctgaaggtaaaagcaatgcacatggaagccattccacactgaatcaacagtca
actttttggcaatcccagcttccctgtggtaccaacaatcatcagaatgttttacaagga
atggatattgatgtatcgcagagaagccaccaacagcctgaacacatggcagaggataca
aatggttctgcaaacggtaatgcgttaaaatcaagccaactttgcagtcctcctgcttcg
agtgcaagttctgttatgagaccattttcagctcccccttcagccggcccttcaaatgtt
cgattaggacagtcacctaagataatgccaggttttccggagcactga
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