Vibrio cholerae O1 2010EL-1786: Vch1786_II0749
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Entry
Vch1786_II0749 CDS
T01650
Symbol
speF
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce00330
Arginine and proline metabolism
vce00480
Glutathione metabolism
vce01100
Metabolic pathways
vce01110
Biosynthesis of secondary metabolites
vce04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Vch1786_II0749 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Vch1786_II0749 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Vch1786_II0749 (speF)
Enzymes [BR:
vce01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Vch1786_II0749 (speF)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AET29167
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Position
2:complement(713709..715871)
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AA seq
720 aa
AA seq
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MNSLKIATSLSVRSCFTTQREVVDVLKTDFCDIGAAVVSVEDVQNGIIDKMNATGLKLPI
FVAVCCEDQFPDDFCADITGVFELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVD
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQ
AYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDTHCFNESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYL
WREAVKTGIEARKLLMKKCKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHA
FEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSIL
FLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMH
DLYVSHDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPY
PPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPELQGVYLEPTGEGRVQAMGYVLKR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattaaaaattgctacgagtttatcggttcgctcttgcttcacaacccaacgt
gaagtggtggatgtactgaaaaccgacttctgtgacattggtgcggcggtggtttccgtc
gaagacgtacaaaacggcatcatagataaaatgaatgcgaccggtttgaaactgccgatc
tttgttgctgtgtgctgcgaagaccaattcccagatgatttttgcgccgatatcaccggg
gtatttgagctgtgtgatgccaaagtcgagttctacggtaagcaagtggaaactgccgtg
cgtcgttatcaagaaagtttgttgccacctttctttggtacattgaaaaaatacgtggac
atgggtaactccacttttgcttgcccaggccatcaaggtggtcagttcttccgtaagcac
ccggttggtcgccagttttttgatttctttggtgaaaccttgttccgctctgatatgtgt
aacgcggacgtacgtttgggcgacttgctgatccatgaaggtgcaccgcatgatgcacag
gcttacgccgcgaaagtgtacaacgcggataaaacctacttcgtacttaacgggacttca
gcttccaacaaagtggtgtgtaacgccctgctgacaccgggagatctggtgctgtttgat
cgcaacaaccataaatccaaccaccacggtgcgttaattcaagcgggtgcgacaccggtt
tacttagaaacggcgcgtaacccattcggttttatcggtgggattgatacgcactgcttt
aacgaatcttacctacgtgatgcggtacgtaatgtcgacccaagccgcgcggaagcgaaa
cgcccattccgtcttgccatcattcagcttggcacttacgacggtacgatttacaacgcg
cgtcaggtggtggatcgcatcggtcatttgtgtgactacatcctgtttgactcagcatgg
gtgggctatgaacagttcattcccatgatgaaagactgctcgccacttcttctcgatcta
aagcctgaagatccgggcatcatcgtcactcagtccgtgcataaacagcaggcaggtttc
tcgcaaacttcgcaaattcacaagaaagatcaccacatcaaaggccaagagcgttactgc
aaccataaacgctttaacaatgcctttatgctgcacgcttcaaccagcccattctacccg
ctgtttgcggcgctcgatgtgaacgccaagatgcacgaaggggacagtggccgctaccta
tggcgtgaagcggtaaaaaccggtatcgaagcccgtaagcttctaatgaaaaaatgcaaa
tacatcaagccgttcattccaccaatgatcgaaggtaaaccttggcagtctcaccccacc
gagcaaattgccgatgatttacgtttctttgaatttgagccgggccagaaatggcatgcg
tttgaaggttacgagcatggtcagtatttcgttgacccttgtaagttcctgctgaccaca
ccggggattgacccagaaactggcgaatacgagcactttggtattccggccaccatactg
gccaacttcctgcgtgagaacaacatcatcccagagaagtgcgatttgaactctatcctc
ttcctgctcaccccagccgaagatatggcgaagatgcagcatttagtggcacaaattgct
cgttttgaacgcttgattgaagaagatgcaccactgagcgaagtattgccgaacgtgtac
cgcgcgaatcgcgaacgctacaaaggctacaccatccgtcagttgtgtcaggaaatgcac
gatctgtatgtcagccatgatgtgaaacagctgcaaaaagagatgttccgcgcgcgttat
ttcccacgtgcggtaatgaacccacaagaagcgaacttggcctttgtacgtggtcaggtt
gagctagtcccactgcgtgaagtggaaggccgtatcgccgctgaaggcgcactgccttac
cctccgggtgtgttgtgtgtggttccgggagaaatatggggcggttcagtacagcgttac
ttcctcgctctagaagaaggcattaacttgctgccgggttttgcgcctgaattgcaaggg
gtgtatttggagccgacaggcgagggacgagtgcaagccatgggctatgtactgaaacgt
taa
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