KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_00475
Entry
IR04_00475        CDS       T03827                                 
Name
(GenBank) type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcf02044]
    IR04_00475
Secretion system [BR:vcf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IR04_00475
SSDB
Motif
Pfam: VipB VipB_2 DMP12
Other DBs
NCBI-ProteinID: AJZ97733
LinkDB
Position
II:117396..118871
AA seq 491 aa
MSTTEKVLERPQLAQGSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVN
KSLVDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTK
DELLEDFEFAPETAQSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGAL
GAMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAP
RFLLRVPYDPIENPVKSFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGP
QSGGAVEDLPVHVFESMGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSA
NSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLER
ELNSWIKQYVADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANF
ELSLVGRLDQA
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtctacgactgaaaaggtattggaaaggccacagcttgctcaaggcagccttcttgat
gaaattatggcgcaaacccgtatcgcaccaagcgaagagggttacgacatcgcgaaaaaa
ggtgttgcagcgtttatcgaaaatcttatgggttcacaacactctgctgagcctgtcaac
aaatctctggttgaccaaatgttggttgaactggataaaaaaatcagtgcacagatggat
gaaatcctgcacaactcacaattccaagcgatggaatcggcgtggcgcggtttgaagctg
ttcgtggatcgcactgattttcgtgaaaataacaaagtcgaaatccttcacgtaaccaaa
gatgaactgctggaagatttcgagtttgctccagaaacggctcagtccggtctttacaag
cacgtttattctgccggttatggtcaatttggtggcgaacctgttggcgcgatcattggt
aactatgcgtttaccccttcaacgccagatatgaagctgctgcaatacatgggcgcactg
ggtgccatggcgcatgctcctttcatttcaagcgtaggtcctgaattctttggtatcgac
tccttcgaagaactgcctaacattaaagatctcaagtcgacatttgaaagcccgaaatac
accaaatggcgttcactgcgtgaatcggaagatgctcgctatcttggtttgactgcgcct
cgtttcctgctgcgtgttccttacgatccaatcgaaaatccagtgaagtcgttcaattat
gcggaaaacgtcagtgcttcgcacgagcactacctgtggggtaacacggcatttgccttc
gcaactcgtttgacggatagctttgctaaatatcgctggtgtccaaacattatcggtcca
caaagtggtggtgcagttgaagatctgccggtgcatgtctttgaatctatgggtgcattg
caaagcaagatcccaaccgaagtcctgatcacggaccgtaaagaatttgaactggcggaa
gaaggttttattgctcttactatgcgtaaaggcagtgataacgcggcgttcttctctgca
aactccattcaaaaacctaaggttttcccaaataccaaagaaggcaaagaagcggaaacc
aactacaagttgggtacccagttgccgtacatgatgatcatcaaccgtttggcgcactat
gtgaaagttctgcaacgtgagcagatcggtgcttggaaagagcgtcaagatcttgagcgt
gaactgaactcatggatcaaacaatacgttgctgatcaagagaacccacctgcagacgta
cgtagccgtcgtccacttcgtgctgcgcgcattgaagtgatggatgtggaaggcaatcca
ggttggtatcaggtgtcgctctcggttcgtcctcactttaagtacatgggtgcgaacttt
gagttgtcattagttggacgtcttgatcaagcctga

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