Vibrio cholerae O1 IEC224: O3Y_09985
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Entry
O3Y_09985 CDS
T01766
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
vci
Vibrio cholerae O1 IEC224
Pathway
vci02020
Two-component system
vci02040
Flagellar assembly
vci05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O3Y_09985 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
O3Y_09985 (fliA)
09142 Cell motility
02040 Flagellar assembly
O3Y_09985 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vci03021
]
O3Y_09985 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vci02035
]
O3Y_09985 (fliA)
Transcription machinery [BR:
vci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O3Y_09985 (fliA)
Bacterial motility proteins [BR:
vci02035
]
Flagellar system
Flagellar assembly proteins
Stator
O3Y_09985 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
UPF0122
GerE
UPF0175
HTH_10
MarR_2
Rv2175c_wHTH
HTH_24
Phage_terminase
HTH_28
MarR
Motif
Other DBs
NCBI-ProteinID:
AFC58871
LinkDB
All DBs
Position
I:complement(2267494..2268228)
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AA seq
244 aa
AA seq
DB search
MNKALTYDQYGNLNSQQLFLEKYSVLVKRIAHHLIGRLPPSVLIEDLIQAGMVGLLEAQK
NYDGSKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKHNREISQAIAVLEGELNRDPTD
AEVAKFLNMSLEQYHSVLMDINCSRIVGIEDLGVSDDAISPFEEGEDNSPFHGVAEESFR
KALVESIKSLPEREALVLSLYYDEELNLKEIGEVLGVSESRVSQILSQSMQRLRTKLSSW
TRND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcgcttacatacgatcaatacggaaatcttaatagccagcagctatttctt
gagaagtactctgtattggttaagcgtatcgctcatcatttgattggtcgtcttccgccc
agtgttctgatcgaagacctcattcaagctggcatggttggtttgcttgaggcacaaaaa
aattatgatggaagtaaaggcgcgagctttgaaacctatgccggaattcggattcgtggg
gctatgctcgacgatatccgacgtggtgactgggttccgcgatctgtgcacaaacataat
cgggaaatcagtcaagcgattgcagtgctcgagggagaactcaatcgcgatccaacggat
gctgaagtggcgaagtttttaaacatgtcactagagcagtatcacagcgtgctgatggac
attaactgttcacgtattgttgggatagaggatctcggtgtttctgacgacgcgatttca
ccgtttgaagagggggaagataactcgccttttcacggtgtcgctgaagaatctttccgt
aaagcactcgttgaatcaataaaatcgctcccggagcgtgaagctttggtactttcgctc
tattatgatgaagagctaaacttaaaagaaattggtgaggtacttggagttagtgaatct
cgcgtcagccagatactcagccaatctatgcagcggctaagaacaaagttaagttcttgg
actcggaatgactaa
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integrated database retrieval system
