Vibrio cholerae O1 MJ-1236: VCD_000629
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Entry
VCD_000629 CDS
T00903
Name
(GenBank) deoxycytidylate deaminase-related protein
Organism
vcj
Vibrio cholerae O1 MJ-1236
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
NAD1
APOBEC2
NAD2
APOBEC_N
MeaB
DUF2482
APOBEC4_like
Motif
Other DBs
NCBI-ProteinID:
ACQ62589
LinkDB
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Position
2:723616..725214
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AA seq
532 aa
AA seq
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MFTMNKSSAKKILSTVPSPTKSNSSSSNDLQKRILERRSRELVIGLCGAIGSGVKALKES
LVSSLETYGYEVVDIRISKIISEKTQTSLDGLSAFKRYNRLQDLGNSLRETHKSSILAAC
AIEEIALERTLICQNEIDETSEENDNEPSLIKTTKKIAYIIDQLKHPDEIKFLRSVYPRN
FYLIGLIRTEGERRLNLEEEKISPSEIDTLMRRDRKDVSHGQQVEKSLFNADYFIHNIHN
QKQMLDKSVERFIKLVHGINGISPTIDEIGMHAAYSAALRSACLSRQVGAAILDNQGNII
STGCNDVPSFGGGLYNSNSLADFRCVHTGRCSNDKHKDILKEEITDILKKSITNTLELKE
IVNQITSETKIKTLIEYSRAVHAEMDSLIALARNNKETSVDKTLYVTTYPCHNCARHIVA
AGIKKVVYVEPYEKSLAMKLHDDSISDNADAKNKVCFLPFEGVSSRRYEVFFQMHGDRKD
DKTGKVLNINIQDSYHADSEFLDNYAEMEAKIAQSVNALLNVPSSEEESIQD
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
ttgtttacaatgaataagtcctccgcaaaaaagatcttaagtacagttccttctccaaca
aaatcaaattctagctcatcaaatgatctccaaaaacgaatactagaacgacgttcaaga
gaactagtcattggcctctgtggggctattggctctggtgtaaaggcattaaaagagagt
ttagttagttctcttgagacatatggatatgaagttgttgatatccggataagtaaaatc
atttcagaaaaaactcaaacctcattagatggattgtcggcatttaagcgttacaaccga
ttgcaagatcttggtaactcgctaagagaaacacataagagctcaattttagcagcctgt
gctatcgaagaaattgcgctggaaagaacattaatctgtcaaaatgaaattgatgaaacc
tcagaagaaaatgacaatgaaccatcgttaataaaaaccacaaaaaagatcgcatacatc
atcgaccagttaaagcaccctgatgaaatcaaattccttagatcggtataccctagaaat
ttctatcttattggcttgatccgtacagaaggagaaagaaggttaaatctagaggaagaa
aaaatctctccatcagaaatagatactctgatgagaagggatcgaaaagatgtttctcat
ggacaacaagtagaaaaaagcctgtttaatgctgattattttattcataacattcacaat
caaaagcaaatgttggataagtcagtagaacggttcataaagctcgttcacggtatcaat
ggtataagtcctactatcgatgaaatcggcatgcatgctgcttattcagcagccctcagg
tctgcatgcttatcaagacaagtgggtgccgcaatacttgataaccaaggcaacattata
tctactggctgtaatgatgtgccaagctttgggggcggtttatataattcaaactcatta
gctgattttcgatgcgtccatactggcagatgctcgaatgataaacacaaagatattctg
aaagaagaaattacagatatattgaagaaatcaatcacaaatacccttgagctaaaagaa
atcgtcaaccaaataacatctgaaaccaagattaaaacattgattgaatattcaagagcg
gttcatgctgaaatggattctcttatagcattagcaagaaacaacaaagaaacatctgta
gataaaacattatatgttacgacatatccgtgtcacaactgtgcgcgacacatcgttgct
gccggaataaaaaaagtcgtatatgtggaaccttatgagaaaagtttagcaatgaaactt
catgatgattctattagtgataatgctgatgcaaaaaataaagtgtgctttttaccattc
gaaggtgtgtcatctcgacgctatgaagtatttttccaaatgcacggtgataggaaagac
gacaaaacaggcaaagtactcaacatcaatatccaggattcttaccacgcagattctgaa
tttttagataattacgcagaaatggaagcaaaaattgcacagtcagtaaacgcattgctg
aacgttccatcgagtgaagaagagagcatccaagactag
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