Vibrio cholerae O1 LMA3984-4: VCLMA_A0329
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Entry
VCLMA_A0329 CDS
T01871
Name
(GenBank) Replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VCLMA_A0329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcl03032
]
VCLMA_A0329
Enzymes [BR:
vcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
VCLMA_A0329
DNA replication proteins [BR:
vcl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VCLMA_A0329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
nSTAND3
GvpD_P-loop
CbiA
Motif
Other DBs
NCBI-ProteinID:
AEA77636
LinkDB
All DBs
Position
I:369325..370731
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AA seq
468 aa
AA seq
DB search
MADPRTDNRNRKIPDAQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVSEHVMTQDFYSR
PHRLIFDGVKSILEAGKPLDLITLSEYLEQREQLEDVGGFAYLADLAKNTPSAANINAYA
EIVAERALVRNLIGVANEIADAGYDPQGRNAEDLLDLAESKVFAIAEARTSENEGPKNVD
SILERTLERIELLYKTPQDGVTGVNTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMN
LCENAAMEQDKPVLIFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGI
LMEKKNMYIDDSSGLTPTEVRSRARRIAREHGGLSLIMVDYLQLMRVPALTDNRTLEIAE
ISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEV
YHPDSPLKGTAEIIIGKQRNGPIGSVRLTFQGHYSRFDNYAGPAFDDE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccacgtactgataatcgaaaccgtaaaattcccgacgcacaagtcgatgca
attaaagtcccaccgcattcattagaagctgagcaatccgtcattggtggactgcttctc
gacaatgagcgttgggatacggtttctgagcacgtgatgactcaggacttctacagccgc
ccgcatcgtttgatttttgacggggtaaaatcgattttagaggcgggtaaaccgctcgat
ctcatcaccttgtccgaatatcttgagcagcgtgagcagttggaagatgtcggtggcttt
gcctatttggccgatttggccaaaaacacgcccagtgcagccaacattaatgcctatgcg
gagattgtggccgaacgggctttggtgcgtaatctgatcggtgttgccaatgagattgcc
gatgcgggatacgatcctcaagggcgcaacgctgaagatttgctggatctggcggaaagt
aaagtttttgcgattgccgaagcacgtaccagtgaaaacgaaggcccgaaaaacgtggat
agcattctagagcgcacgctagagcggattgagctgctctacaaaacgccacaggatggg
gtcactggggtgaacacgggctttaccgacctgaataaaaagacggctggtttgcaaggc
tctgatctgatcatcgtcgcagcgcgtccttcgatgggtaaaactacttttgcgatgaac
ctgtgtgaaaacgccgcgatggagcaagataaacctgtgctgatcttctcgctggagatg
cccgccgaacagatcatgatgcgtatgctggcctcgttatctcgtgttgaccaaaccaaa
attcgtaccggtcaactggatgatgaagattgggcgcgtatctcttccaccatgggtatt
ctcatggagaagaagaacatgtacatcgatgatagctcaggtctaacccccaccgaagtt
cgctcgcgtgcccgacgcattgctcgtgaacacggaggcttgtcgctcatcatggtcgac
tatttacagctgatgcgtgtaccggcattgaccgataaccgtacactggaaattgctgaa
atttctcgctcactcaaagcgttagctaaagaattgaatgtgcccgtggttgcgctttcg
cagttgaaccgttctttggagcagcgtgcggataagcgtccagtcaactcggatctgcgt
gaatcgggttcgattgagcaggatgctgacttgatcatgtttatctatcgagatgaggtg
tatcacccagatagtccgctaaaaggcacggcggaaatcattattggtaagcaacgtaac
ggcccgattggttcggtgcgtttgactttccaaggtcactattctcgtttcgacaactat
gctggacctgcatttgacgatgagtaa
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