Vibrio cholerae O1 LMA3984-4: VCLMA_A0466
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Entry
VCLMA_A0466 CDS
T01871
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VCLMA_A0466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcl03400
]
VCLMA_A0466
DNA repair and recombination proteins [BR:
vcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VCLMA_A0466
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
CENP-Q
Motif
Other DBs
NCBI-ProteinID:
AEA77763
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Position
I:complement(520727..523312)
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AA seq
861 aa
AA seq
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MKSNASPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLT
KRGASAGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTP
GTVTDEALLSERVDNLIAAIYHHNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSPR
ELLFPEDFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCA
AGCLIQYVKDTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVLD
HCATPMGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILAR
LALRSARPRDLARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMDGLCDLLERAIKEN
PPVVIRDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFY
IQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDL
LLPHLEQLQQLAASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVERVMNE
PFIANPIELNPQRRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAENARIGPLDRIF
TRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAEW
LAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLA
VAGLAGVPKPVIKNARAKLQQLELLSSQPAETRKPSRVDIANQLSLIPEPSAVEQALAGV
DPDQLTPRQALDMLYQLKKLL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgaacgcctcaccgagcgagtctctttcgcaccacaccccgatgatgcaacag
tatttaagactcaaggcggaaaacccagacattctgctgttctatcgcatgggtgatttt
tacgaactgttttatgacgatgccaaacgcgcctctgagctgctggacatttccttaacc
aaacgcggcgcatcggcgggtgaacccatcccgatggcaggggtgcctttccatgccgtg
gaaggttatttagcgaaactcgtccagatgggggaatcggtcgcgatctgcgaacagatt
ggtgacccagcgaccagcaaaggccccgttgagcgcaaagtggtgcggattgtgacaccg
ggaacggtaaccgatgaagccctgctctcagagcgagtcgataacctgatcgcggcgatt
tatcaccataacggccgctttggctacgcgaccatggatatcacctccggccgttttcag
ctcagtgaaccgcaaaccgaagaagagatggcggcagaactgcaacgcacttcgcctcgt
gaactcttgtttcctgaagatttttcgccagtgcatctaatggcaagccgccaaggcaac
cgccgtcgcccgatttgggaatttgagctcgatactgcgaaacagcagctcaaccagcaa
tttggcacgcgcgatctggttggctttggggttgagcaagcaaaacttggcttgtgcgct
gccggctgcttgatccaatacgtgaaagatactcagcgtactgctttgccacacatccgt
tcactgacttgggatcgccaagatcaatcggtgattttggatgccgcgacgcggcgcaac
cttgagctcactcataacttggcgggtggaacagataacacgcttgcagaagtactcgac
cattgtgcgaccccgatgggcagtcgtatgctcaaacgttggatccaccaaccgatgcgc
gataacgccaccctcaatcagcgtttagatgcgatcactgagctcaaagaaacagcgttg
tatggtgaactgcatcctgtactcaaacagattggcgatattgaacggatcctcgcccgt
ctagcgctgcgctcagcgcggccgcgcgatttagctcgcctacgccacgccatgcagcag
ttaccagaattgcactcggtcatgagcgagcttaagcagcctcaccttaccgagctacgc
acccatgccgagccaatggatggattgtgcgatttactcgaacgtgcgatcaaagaaaac
ccacccgtggtaatccgcgatggtggcgtgatcgccgatggttacagtgctgaactcgat
gagtggcgcgatttggccaacggggcaaccgaatttctggaacgcttggaagccgaagag
cgtgatcgccacgggatcgacaccctaaaagtcggttataacaatgtgcacggtttctac
attcaagtcagtcggggtcagagccatttagtgcctccccactatgtacgccgccaaacc
ttaaaaaatgctgagcgttacatcatcgaagaacttaaacagcatgaagataaagtgctc
aattctaagtctcgtgctttagcgttagaaaaacagctgtgggaagagttgttcgatttg
ctgttgccgcatcttgagcagctgcaacaactggcggcttccgttgctcaattggatgtg
ctgcaaaacctcgcagagcgcgcagaaaacttggaatattgtcgcccaacgctggttcaa
gaagcgggcattcacatccaaggtggtcgccaccctgtggtagagcgagtaatgaatgag
ccgtttatcgccaacccgatcgaacttaatccacagcgacgcatgctgatcattactggc
ccgaatatgggtggtaaatcgacttacatgcgccaaaccgccttgattgcactgatggca
cacatcggcagttatgtgcctgcagaaaatgcccgaattggtcctttggatcgcattttt
acccgtatcggcgcgtcagatgacctcgcgtcaggccgttcaaccttcatggtggagatg
accgaaaccgccaatattttgcacaatgcgacccgcaacagcttggtgctgatggatgag
attggccgcggtaccagtacttatgacggactctcgctcgcttgggcgagtgccgagtgg
cttgccaaagagattggtgccatgacgctgtttgccactcactattttgagttaaccgaa
ctgccgaatgtgttacctcatctagcgaatgttcatttagatgcggtggaacatggtgat
ggcatcgcctttatgcacgcagtgcaagagggtgccgcgagtaaatcgtatggtttagcc
gtagcaggactggctggcgtacccaagcccgtgattaaaaatgcgcgcgccaagttacaa
caacttgagctattaagctcacaacctgccgagactcgtaagccaagccgcgtcgatatt
gccaaccagttgagcttaattcctgagccaagtgcagttgagcaagccttggcaggcgta
gatcctgaccagctcacacctcgccaagctctggatatgctctatcaattgaaaaagctg
ctctag
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