Vibrio cholerae O1 M66-2: VCM66_0383
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Entry
VCM66_0383 CDS
T00891
Symbol
mshH
Name
(GenBank) MSHA biogenesis protein MshH
KO
K18765
RNase E specificity factor CsrD
Organism
vcm
Vibrio cholerae O1 M66-2
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcm03019
]
VCM66_0383 (mshH)
Messenger RNA biogenesis [BR:
vcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VCM66_0383 (mshH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Motif
Other DBs
NCBI-ProteinID:
ACP04709
UniProt:
C3LRC9
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All DBs
Position
I:407989..410010
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AA seq
673 aa
AA seq
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MAQMRYTPTLKLSTRLVAFVTMTVISAMFILFLGGTLSFQRLGQEYLNHYLQGIVEVVDK
EMEDPDAAYSMQRWMPKMLQASGIIEMQLTSEAGPIYRFKDTTNTIEASRLHQVALPLKR
NPGYVMHFKAVPPYLNYNYSLQAMWSTTLAVLLIVFFLIRGLKWLKEQLLGSELLEERGR
MILAGRVEQHAKGDPREWPFTASEALDRLIEELQDARQERSRFDTFIRSQTFLDQLTGTA
NRVLYDSKLESALLESGAHGGVMMLRVDDLESAREESPKRTLDEFIIEVGECLSNIVQRY
PDAILSRYYEDVFALFIPHQGSKDIAQVATQAIKLIERINPPEPLPEDNWFHIGVTMYQE
GERRGRIIDEMETALKSAQLQGVNAWSRFQKPKQLQEDRGSVRWRTLFEQVLRPEEILLY
RQACYRISANGEREFLHYELFARIQDPQQGILKASRFSSALETVGYEAMLDRAVFSSVVS
FLKRSELVEPLSVNLHVVPFNDKRYARWIRNELMQMPFSLRTALSFEFSEAHLVNHLDYM
RPIIRMLAGLGCKIVVGQAGRTIVSTHYIKDLKVNYLKLHRSLIKKIDQRHENQLFVRSL
VGVCGGTQAEVVAVGVETTQEWQTLQMLGVSGVQGRLFDEEQQMLPPLPPEPLKRPPRLS
VKPIGKRNRWRTK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaaatgaggtatacaccgacattaaaactgagcactcggttagtggcgttcgtc
actatgacggtgatcagtgccatgtttatcctgttccttggtggcaccttatcttttcag
cgtttggggcaggaatacctcaaccactatctacaagggatagttgaggttgtcgataag
gagatggaagatccagacgccgcttactctatgcagcgttggatgcccaaaatgcttcaa
gcgagtggcatcattgaaatgcagcttacttccgaagcgggccccatctaccgttttaaa
gacaccaccaacaccattgaagcttcacgtttgcatcaagtcgctttaccgctcaaacgt
aatcccggttatgtgatgcattttaaagcggtgcctccctacctcaattacaactattca
ctgcaagccatgtggtcgaccaccttagcggtgctactgatcgtatttttcttgatccgc
ggtctgaaatggttgaaagagcaactactaggatcggagttactggaagagcgaggacgg
atgattcttgctggacgagtggagcaacatgccaagggggatccgcgagagtggcctttc
accgcaagtgaagccttagatcgcttgattgaagagttgcaagatgcccgtcaagaacgt
agccgttttgatacctttattcgtagccaaaccttcctcgatcaactgaccgggacggcg
aatcgggtgttgtatgacagtaagctggaatcggctttactggagagtggcgctcacggc
ggcgttatgatgctgcgggtcgatgacttagagtcagcgcgagaagagagccctaaacgt
acgctcgatgagtttatcattgaggtgggggagtgtttatccaacatagtacagcgttat
ccggatgccatactttctcgctactatgaggatgtgtttgcgctgtttattcctcatcag
ggtagtaaagatattgctcaagtagcgacacaggcgattaagttgattgagcgcatcaat
ccccctgagccactgccagaagacaattggttccacattggtgtaaccatgtatcaagaa
ggtgagcggcgtggacggattattgatgagatggaaaccgcgctcaaaagtgctcaactg
caaggggtgaatgcgtggagccgttttcaaaaacctaaacagttacaagaggatcgcggt
agcgttcggtggcgtacattgtttgaacaggtgcttcgtccggaagagattttgctctat
cgccaagcctgttatcgtatttctgctaatggagagcgggagttcctacattatgagtta
tttgcgcgtattcaggatccgcaacaaggcattctcaaagcgtcgcgttttagctcagct
ttagaaacggtcggctatgaagccatgttggatcgtgccgtattcagctctgtcgtgagt
tttttgaagcgctctgaactggttgaaccactctcggtaaacttgcacgttgttccattt
aacgataaacggtatgctcgctggattcgcaacgaattgatgcagatgcctttttctctt
agaacggcgctctcttttgagttttcagaagcgcatttggtcaaccatttagactatatg
cgccccatcattcgcatgttggcggggctgggttgcaagatagtggtgggacaagcggga
cgaacaattgtcagcacgcactatatcaaagacttaaaagtcaactatcttaaacttcat
cggagtttgataaagaaaattgaccaacgccatgaaaatcagctgttcgttcgcagtttg
gtaggtgtatgtggcggtacccaagcagaagtggttgcggttggggttgaaactactcaa
gagtggcaaaccttacagatgctgggtgtcagtggtgtgcaaggtcgcttgtttgatgag
gagcaacagatgttgcctcctttgccaccagagccattgaaacgccccccgcgtctctct
gtaaagcccatcggcaaacgtaatcgatggcgaaccaaatag
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