KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_118285
Entry
VOLCADRAFT_118285 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K11491  condensin-2 complex subunit D3
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_118285
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin II
    VOLCADRAFT_118285
SSDB
Motif
Pfam: Cnd1 HEAT Cnd3 HEAT_2 TPMT
Other DBs
NCBI-GeneID: 9625734
NCBI-ProteinID: XP_002953183
JGI: 118285
UniProt: D8U385
LinkDB
Position
Unknown
AA seq 1678 aa
MSRSPKPLTSTDANILALLADVQPVALTAELSQRICEAAAATVAHVERLNAVPPSPVPAT
RGPDSSSITTAATVPGVLCPWLASTTAVRQLLSQGFKVVAVECQSAAVERACAELGLGAE
ERGCSRRLPSVAAIATTTAAAAAGGCCQAFPLHAVWDVWGLLVTPPELLSRYAAVWAELL
PRGGAWLAAAAVCTELLPPPREPAGAAADGCPALAASLSSQGLHVHDLAGVLMPTLERAG
FAIVQLLAPSRDQVAEEAGGGVAVANGDLTEQSAEDALSEALEAALNLRASLGWAGLEGE
EVSAAALTRALGEILKNTQAGLQGRAATVYATILSIQDAPDVGKFLKHHSMRGNPEMFQL
LLETLVDLTGSTAASGKPEKGSKRGGAAARNQGSHGGGASVAEAAFAVLPLAMDPRHHSV
TQIASVVCQRITPVLVGIDTAKRSGHGWDRRTAALNLIKNFFSTHDAAQPCRAALLRRIC
LRTPEKADYRQVAINSVQTLLSGCTPAEVRAFCLFLYRLSRNPKIAHRTIAVDLAAVFLS
TMPAPFAATDSYQRLLDGSCGAGDQLDAPWSAICLAIIVARANDKSPTVRGKAIGCLADI
VQTFAKRLLDAPDGGREAADIAAFLPAFCASRHICVQVNRPHGAGTGDADGGSDNDAEGA
GGSGGRTADDKNEGPGIAPPPETEATATIPGKVSLELSWMRAMCHSRCRDDKAAVRKVAL
QLLESVLELCAAAARAQPPLQQAAGQRAAAEGPSAEDIQVLEDGTADSLVSVRKAALQVV
CNLVVCYPHNADLACIWARCVLPLIRDPESAIQEVVVERLSNLLLEPVAVLGSRGGGGRG
RQQACAELQPRFAALAQMGRAASSCLGKALGMMAAKKLLKGPQVAAGLEAFLTTGPGIHV
DNEREDTATEDAAGTGAAAQSRGSQIDTQQERQLQRREQHRVARDQREGAWMLLVEVAGH
DPAAPSWQFLQRCWDELQAGCAGTNGERSAQEGAMLLWVISHAASRFPAADAANLASGLL
SAILGFNLPCAAVAAHLVALHKLTQAEGGQAVVGQPAEWCAKVQVACEEVLTNAMESRGN
MSNALATHCQLALFTLGEVALLQETALPGGAAVKAAVSSHAWTCLGKMCMADEGLAKKCV
PLLEMSGSPNPVVRINLLVGLADMVVQFTGLADAYVGRLADMVRDPHELVRRQALALLAN
LLLRDYVKWRGSLVHRRRARTHKRSTSRPVPVWEITIPGLCDRFLLALVDESPSVRQLAQ
YLLSDSLVAKAPMLAYNHFIESLFVLNACSAGLHARRAAGAAAAELASELVSELALHSSQ
EGSGSFHLKGATPVMRAKRDIIYTALLRRMSPEHRFSAFARLTADILGGVVDGLLPLAEA
DEVLGDALRLLACPDMKVNANRFGAPAEEDMEQLTGTQEDVAKARGKLVGAMMRKHLVDS
VMPLMVELRYMLQAQKHPLLGSLMLCMATLLRDYKSEVEDILVSDKQLALEITHDIKHYE
TLAKQQQRQQEAAMAAALAVKPAAACPSASNARATPQNHAAALAATAAASHLTPPAHVER
QRRQTAILPGVEPARTPLAAEVLATASRRGLQGPQQAMQRTPIAAAGPGVGPSAAAVTPA
ARMQGAACQVSLPFVRAQCQKGVTKGNISAPNTPQVLPPCALRALGSLAPFNATFLAA
NT seq 5037 nt   +upstreamnt  +downstreamnt
atgtcccggagcccgaagccacttacaagtactgatgccaacattcttgcgctgcttgcg
gacgtgcagcccgtggcgctgacggccgagctgtctcaaaggatctgcgaagccgctgct
gctacagtcgcccatgtagagcgactgaatgcagtgcctccgtcacccgtgccggcgaca
cgggggcccgacagctcctcaattaccactgcagccaccgtcccaggagtactctgcccc
tggcttgcaagtacgaccgctgtacggcaattgctgtcgcaaggtttcaaggttgtggct
gtggagtgccagtccgctgcggtggagcgagcctgcgcagaactgggactgggtgcggag
gagaggggctgcagtcgccgcctcccatccgtcgctgccatcgccaccaccacagcagca
gctgcagcaggaggctgctgccaggccttcccgcttcacgccgtgtgggatgtctggggc
ttgctggtgacgccgccggagctgctgtcgcgctacgccgccgtgtgggcggagctactg
ccgcgtggcggagcttggctcgccgccgccgccgtgtgtacggagctgctgccaccgccg
cgggagcccgcgggagctgctgctgacggttgcccggcgctagcagcatccctgagctct
caggggttgcatgtacacgacctggcgggtgtgttgatgcccaccctggagcgcgcgggt
tttgcgatcgtgcagttgttggcccctagtagggaccaggttgctgaggaggcgggaggt
ggtgtcgcggtggcaaatggtgacttgactgaacagagcgctgaggatgccttatcagaa
gctttggaagcagctttaaatctcagagcaagcctaggctgggcgggtttggaaggcgaa
gaggtttcagcagcagcgctgactcgcgctcttggtgagattcttaagaacacacaggca
gggctccagggccgcgcagcaaccgtgtacgccactattctgagtatccaagacgcacca
gacgtgggcaaatttcttaagcatcatagcatgcgaggtaaccccgagatgttccagcta
cttttggaaacccttgtagacctcaccggcagcacagcggcatccggcaagcctgagaag
ggcagcaagcgcggtggcgcagcagcgcggaaccagggctctcatggaggcggagcatct
gttgcggaggcggcctttgcagtgctgccgttggcgatggatccccggcaccacagcgta
actcaaatagctagcgtggtttgccaacgcattacgcctgtgttggttggaatagacacg
gcgaagcgcagtggccacggctgggatcgtcgtacggcagccctgaacctcataaaaaac
ttcttcagcacccatgacgctgcgcagccctgccgagcggccctgctgcgtcgaatatgc
ttgcggacgccagaaaaagcggactaccgtcaggtcgccatcaactcggtgcaaacactt
ctgtcgggctgcacacccgccgaggtccgagcgttctgcctcttcctctaccgcctttca
cggaacccaaagatcgcccaccgcactattgctgtggatctggcggccgtgttcctgtcc
accatgccggcgccgttcgcggccactgactcataccagcggctgcttgatggcagctgc
ggtgcgggagaccagctggacgccccttggagcgcaatctgcttggccatcatcgtcgcg
cgcgcgaacgacaagtcccccaccgtgcgcggcaaggcgatcggctgcctggctgacatc
gtgcagacgttcgctaagcggctgttggacgcgcccgatggcggccgggaggccgctgat
atcgccgccttcttacctgcattctgtgcctcgcgccacatctgcgtccaggtcaatcgt
ccgcatggagcgggaacaggagacgcggatggagggtcagacaatgacgctgaaggcgct
ggtggcagcggtgggcgcacggccgatgataagaatgagggcccaggaatagccccaccg
cccgagacggaggcgacggctaccatccccggcaaggtttcattggaattgtcctggatg
cgagccatgtgccacagtcgatgtcgtgatgataaggcggccgttcgcaaagtggcgctg
cagctgcttgaaagcgtcttggagctatgtgcggcagcggctagggctcagccgccactg
cagcaagctgctggccagcgtgcggcggcagagggcccctccgcagaggatatccaagtc
ttggaggatggcacagcggactcactggtcagcgtgcgcaaggccgccctgcaggtcgtg
tgcaacctcgtagtgtgctacccacacaacgcggacctggcctgcatatgggcgcgctgt
gtgctgcccctgatccgggacccggagagcgccattcaggaggtggtcgtggaacgactg
tccaatttgctcttagagcccgtggcggtgctgggctccaggggtggtggtggccgcggc
cggcagcaggcctgcgcggagctccagccgaggttcgctgcactcgcgcaaatggggcga
gcagcgtcaagctgcctgggcaaggcattggggatgatggcggcgaagaagctgctgaag
gggccccaggttgctgcgggcctggaggcgttccttacaacaggcccaggcatccatgtt
gacaacgagcgtgaggacacagcaacggaggatgccgccggcaccggcgctgccgcgcaa
tctcggggaagccagatagacacacagcaagagcggcagctgcagcgacgggagcaacat
cgagtggcacgggaccagcgtgagggggcatggatgctgcttgttgaggttgcgggccat
gatcccgccgcaccatcgtggcagttcctgcagcgttgctgggatgagctgcaggccggg
tgtgcggggactaatggtgaaaggtccgcgcaggagggcgccatgctgctgtgggtaatc
agccacgctgcgtctcgtttccccgcggcagatgccgcgaacctggcgtccgggcttcta
tcggccattctgggcttcaacctgccgtgcgctgccgtggcggcccacctggtggcgtta
cacaagctgacgcaggcggagggtgggcaggcggttgtgggacagccagccgagtggtgt
gccaaggtgcaggtggcctgcgaagaggtgctcacaaatgctatggaatcgcgtggtaac
atgagcaacgcgcttgctacccactgccagctggcgctgttcactcttggcgaggtggca
ctgctccaggagacagcgctcccgggcggtgcggcggtcaaggctgcagtgtcttcccat
gcgtggacctgcctgggcaagatgtgcatggccgacgaagggcttgccaagaagtgtgta
ccgttgctggagatgtcggggtccccgaacccggtcgtccgaattaacctgctggtcggg
ctggccgacatggtagtgcagttcacagggctggcggacgcatacgtggggcgactggcg
gacatggtgcgcgacccccacgagctagtgcgtcgtcaggcactggccctgctggccaac
ctgctgctgcgtgactacgtcaagtggcggggctccctggtgcacagaagaagggcacgg
acacacaagcgctctacttcccgtccagtgcctgtgtgggagataactattcctgggtta
tgtgacaggttcctgctcgcactagtggacgaatcacccagcgtgcgtcagctggcgcag
tacttgctcagcgactccctggtggccaaggcgcccatgttggcatacaaccacttcatc
gagtcgctcttcgtgctcaacgcctgcagcgcgggccttcatgcacgccgtgccgctggc
gctgctgctgctgagctggcgtcagagctggtgtcagagctggccctgcatagcagccag
gagggaagcggctccttccatctgaagggtgcaacgcctgtcatgagagccaagcgcgac
atcatctacacggccctcctccggcggatgagtcccgagcaccgtttctcggcattcgcc
aggctcaccgcggacatcctaggaggcgtcgtggacgggttgctaccgctggcagaggcg
gatgaagtcctaggcgacgcactgcggttgctggcatgcccggacatgaaggtgaatgcc
aaccgcttcggtgcgcccgctgaggaagacatggagcagctgaccggcacgcaggaggac
gtcgcgaaggcgcgcggcaaactggttggcgccatgatgcggaagcacctggtcgacagc
gtgatgccactgatggtagagctcaggtatatgctgcaggcgcagaagcacccgttgctg
ggctcgttgatgctctgcatggccaccctcctccgggactacaagtccgaggtggaggac
attcttgtatcggacaagcagctggcgctggagatcactcacgacataaagcactacgag
accttggccaagcagcagcaacggcagcaagaggcagccatggcggctgctcttgctgta
aagcctgctgcagcctgtcctagcgccagcaacgcaagggctacaccccagaaccacgcc
gctgcactggcagccaccgcggccgcgtctcatttaacgccaccagcccatgtcgagaga
cagcgacggcagactgccatattgccaggcgtcgagccggcccgcacaccgttggctgca
gaggtgctcgcgacggcctcgaggcgtggccttcaaggtccccaacaagctatgcagcgc
actccaattgcggcggcggggcccggtgtggggccgtcagctgcagccgtgactccagcg
gcaagaatgcaaggggcagcttgtcaagtctctcttccattcgtgcgtgcgcagtgtcaa
aaaggggttacaaagggtaatatatcggctcccaacacaccacaggttctgccgccatgc
gcactccgcgcactggggtccctggcaccattcaacgcaacattcctggcggcttga

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