Volvox carteri f. nagariensis: VOLCADRAFT_118285
Help
Entry
VOLCADRAFT_118285 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K11491
condensin-2 complex subunit D3
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_118285
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
VOLCADRAFT_118285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cnd1
HEAT
Cnd3
HEAT_2
TPMT
Motif
Other DBs
NCBI-GeneID:
9625734
NCBI-ProteinID:
XP_002953183
JGI:
118285
UniProt:
D8U385
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MSRSPKPLTSTDANILALLADVQPVALTAELSQRICEAAAATVAHVERLNAVPPSPVPAT
RGPDSSSITTAATVPGVLCPWLASTTAVRQLLSQGFKVVAVECQSAAVERACAELGLGAE
ERGCSRRLPSVAAIATTTAAAAAGGCCQAFPLHAVWDVWGLLVTPPELLSRYAAVWAELL
PRGGAWLAAAAVCTELLPPPREPAGAAADGCPALAASLSSQGLHVHDLAGVLMPTLERAG
FAIVQLLAPSRDQVAEEAGGGVAVANGDLTEQSAEDALSEALEAALNLRASLGWAGLEGE
EVSAAALTRALGEILKNTQAGLQGRAATVYATILSIQDAPDVGKFLKHHSMRGNPEMFQL
LLETLVDLTGSTAASGKPEKGSKRGGAAARNQGSHGGGASVAEAAFAVLPLAMDPRHHSV
TQIASVVCQRITPVLVGIDTAKRSGHGWDRRTAALNLIKNFFSTHDAAQPCRAALLRRIC
LRTPEKADYRQVAINSVQTLLSGCTPAEVRAFCLFLYRLSRNPKIAHRTIAVDLAAVFLS
TMPAPFAATDSYQRLLDGSCGAGDQLDAPWSAICLAIIVARANDKSPTVRGKAIGCLADI
VQTFAKRLLDAPDGGREAADIAAFLPAFCASRHICVQVNRPHGAGTGDADGGSDNDAEGA
GGSGGRTADDKNEGPGIAPPPETEATATIPGKVSLELSWMRAMCHSRCRDDKAAVRKVAL
QLLESVLELCAAAARAQPPLQQAAGQRAAAEGPSAEDIQVLEDGTADSLVSVRKAALQVV
CNLVVCYPHNADLACIWARCVLPLIRDPESAIQEVVVERLSNLLLEPVAVLGSRGGGGRG
RQQACAELQPRFAALAQMGRAASSCLGKALGMMAAKKLLKGPQVAAGLEAFLTTGPGIHV
DNEREDTATEDAAGTGAAAQSRGSQIDTQQERQLQRREQHRVARDQREGAWMLLVEVAGH
DPAAPSWQFLQRCWDELQAGCAGTNGERSAQEGAMLLWVISHAASRFPAADAANLASGLL
SAILGFNLPCAAVAAHLVALHKLTQAEGGQAVVGQPAEWCAKVQVACEEVLTNAMESRGN
MSNALATHCQLALFTLGEVALLQETALPGGAAVKAAVSSHAWTCLGKMCMADEGLAKKCV
PLLEMSGSPNPVVRINLLVGLADMVVQFTGLADAYVGRLADMVRDPHELVRRQALALLAN
LLLRDYVKWRGSLVHRRRARTHKRSTSRPVPVWEITIPGLCDRFLLALVDESPSVRQLAQ
YLLSDSLVAKAPMLAYNHFIESLFVLNACSAGLHARRAAGAAAAELASELVSELALHSSQ
EGSGSFHLKGATPVMRAKRDIIYTALLRRMSPEHRFSAFARLTADILGGVVDGLLPLAEA
DEVLGDALRLLACPDMKVNANRFGAPAEEDMEQLTGTQEDVAKARGKLVGAMMRKHLVDS
VMPLMVELRYMLQAQKHPLLGSLMLCMATLLRDYKSEVEDILVSDKQLALEITHDIKHYE
TLAKQQQRQQEAAMAAALAVKPAAACPSASNARATPQNHAAALAATAAASHLTPPAHVER
QRRQTAILPGVEPARTPLAAEVLATASRRGLQGPQQAMQRTPIAAAGPGVGPSAAAVTPA
ARMQGAACQVSLPFVRAQCQKGVTKGNISAPNTPQVLPPCALRALGSLAPFNATFLAA
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggagcccgaagccacttacaagtactgatgccaacattcttgcgctgcttgcg
gacgtgcagcccgtggcgctgacggccgagctgtctcaaaggatctgcgaagccgctgct
gctacagtcgcccatgtagagcgactgaatgcagtgcctccgtcacccgtgccggcgaca
cgggggcccgacagctcctcaattaccactgcagccaccgtcccaggagtactctgcccc
tggcttgcaagtacgaccgctgtacggcaattgctgtcgcaaggtttcaaggttgtggct
gtggagtgccagtccgctgcggtggagcgagcctgcgcagaactgggactgggtgcggag
gagaggggctgcagtcgccgcctcccatccgtcgctgccatcgccaccaccacagcagca
gctgcagcaggaggctgctgccaggccttcccgcttcacgccgtgtgggatgtctggggc
ttgctggtgacgccgccggagctgctgtcgcgctacgccgccgtgtgggcggagctactg
ccgcgtggcggagcttggctcgccgccgccgccgtgtgtacggagctgctgccaccgccg
cgggagcccgcgggagctgctgctgacggttgcccggcgctagcagcatccctgagctct
caggggttgcatgtacacgacctggcgggtgtgttgatgcccaccctggagcgcgcgggt
tttgcgatcgtgcagttgttggcccctagtagggaccaggttgctgaggaggcgggaggt
ggtgtcgcggtggcaaatggtgacttgactgaacagagcgctgaggatgccttatcagaa
gctttggaagcagctttaaatctcagagcaagcctaggctgggcgggtttggaaggcgaa
gaggtttcagcagcagcgctgactcgcgctcttggtgagattcttaagaacacacaggca
gggctccagggccgcgcagcaaccgtgtacgccactattctgagtatccaagacgcacca
gacgtgggcaaatttcttaagcatcatagcatgcgaggtaaccccgagatgttccagcta
cttttggaaacccttgtagacctcaccggcagcacagcggcatccggcaagcctgagaag
ggcagcaagcgcggtggcgcagcagcgcggaaccagggctctcatggaggcggagcatct
gttgcggaggcggcctttgcagtgctgccgttggcgatggatccccggcaccacagcgta
actcaaatagctagcgtggtttgccaacgcattacgcctgtgttggttggaatagacacg
gcgaagcgcagtggccacggctgggatcgtcgtacggcagccctgaacctcataaaaaac
ttcttcagcacccatgacgctgcgcagccctgccgagcggccctgctgcgtcgaatatgc
ttgcggacgccagaaaaagcggactaccgtcaggtcgccatcaactcggtgcaaacactt
ctgtcgggctgcacacccgccgaggtccgagcgttctgcctcttcctctaccgcctttca
cggaacccaaagatcgcccaccgcactattgctgtggatctggcggccgtgttcctgtcc
accatgccggcgccgttcgcggccactgactcataccagcggctgcttgatggcagctgc
ggtgcgggagaccagctggacgccccttggagcgcaatctgcttggccatcatcgtcgcg
cgcgcgaacgacaagtcccccaccgtgcgcggcaaggcgatcggctgcctggctgacatc
gtgcagacgttcgctaagcggctgttggacgcgcccgatggcggccgggaggccgctgat
atcgccgccttcttacctgcattctgtgcctcgcgccacatctgcgtccaggtcaatcgt
ccgcatggagcgggaacaggagacgcggatggagggtcagacaatgacgctgaaggcgct
ggtggcagcggtgggcgcacggccgatgataagaatgagggcccaggaatagccccaccg
cccgagacggaggcgacggctaccatccccggcaaggtttcattggaattgtcctggatg
cgagccatgtgccacagtcgatgtcgtgatgataaggcggccgttcgcaaagtggcgctg
cagctgcttgaaagcgtcttggagctatgtgcggcagcggctagggctcagccgccactg
cagcaagctgctggccagcgtgcggcggcagagggcccctccgcagaggatatccaagtc
ttggaggatggcacagcggactcactggtcagcgtgcgcaaggccgccctgcaggtcgtg
tgcaacctcgtagtgtgctacccacacaacgcggacctggcctgcatatgggcgcgctgt
gtgctgcccctgatccgggacccggagagcgccattcaggaggtggtcgtggaacgactg
tccaatttgctcttagagcccgtggcggtgctgggctccaggggtggtggtggccgcggc
cggcagcaggcctgcgcggagctccagccgaggttcgctgcactcgcgcaaatggggcga
gcagcgtcaagctgcctgggcaaggcattggggatgatggcggcgaagaagctgctgaag
gggccccaggttgctgcgggcctggaggcgttccttacaacaggcccaggcatccatgtt
gacaacgagcgtgaggacacagcaacggaggatgccgccggcaccggcgctgccgcgcaa
tctcggggaagccagatagacacacagcaagagcggcagctgcagcgacgggagcaacat
cgagtggcacgggaccagcgtgagggggcatggatgctgcttgttgaggttgcgggccat
gatcccgccgcaccatcgtggcagttcctgcagcgttgctgggatgagctgcaggccggg
tgtgcggggactaatggtgaaaggtccgcgcaggagggcgccatgctgctgtgggtaatc
agccacgctgcgtctcgtttccccgcggcagatgccgcgaacctggcgtccgggcttcta
tcggccattctgggcttcaacctgccgtgcgctgccgtggcggcccacctggtggcgtta
cacaagctgacgcaggcggagggtgggcaggcggttgtgggacagccagccgagtggtgt
gccaaggtgcaggtggcctgcgaagaggtgctcacaaatgctatggaatcgcgtggtaac
atgagcaacgcgcttgctacccactgccagctggcgctgttcactcttggcgaggtggca
ctgctccaggagacagcgctcccgggcggtgcggcggtcaaggctgcagtgtcttcccat
gcgtggacctgcctgggcaagatgtgcatggccgacgaagggcttgccaagaagtgtgta
ccgttgctggagatgtcggggtccccgaacccggtcgtccgaattaacctgctggtcggg
ctggccgacatggtagtgcagttcacagggctggcggacgcatacgtggggcgactggcg
gacatggtgcgcgacccccacgagctagtgcgtcgtcaggcactggccctgctggccaac
ctgctgctgcgtgactacgtcaagtggcggggctccctggtgcacagaagaagggcacgg
acacacaagcgctctacttcccgtccagtgcctgtgtgggagataactattcctgggtta
tgtgacaggttcctgctcgcactagtggacgaatcacccagcgtgcgtcagctggcgcag
tacttgctcagcgactccctggtggccaaggcgcccatgttggcatacaaccacttcatc
gagtcgctcttcgtgctcaacgcctgcagcgcgggccttcatgcacgccgtgccgctggc
gctgctgctgctgagctggcgtcagagctggtgtcagagctggccctgcatagcagccag
gagggaagcggctccttccatctgaagggtgcaacgcctgtcatgagagccaagcgcgac
atcatctacacggccctcctccggcggatgagtcccgagcaccgtttctcggcattcgcc
aggctcaccgcggacatcctaggaggcgtcgtggacgggttgctaccgctggcagaggcg
gatgaagtcctaggcgacgcactgcggttgctggcatgcccggacatgaaggtgaatgcc
aaccgcttcggtgcgcccgctgaggaagacatggagcagctgaccggcacgcaggaggac
gtcgcgaaggcgcgcggcaaactggttggcgccatgatgcggaagcacctggtcgacagc
gtgatgccactgatggtagagctcaggtatatgctgcaggcgcagaagcacccgttgctg
ggctcgttgatgctctgcatggccaccctcctccgggactacaagtccgaggtggaggac
attcttgtatcggacaagcagctggcgctggagatcactcacgacataaagcactacgag
accttggccaagcagcagcaacggcagcaagaggcagccatggcggctgctcttgctgta
aagcctgctgcagcctgtcctagcgccagcaacgcaagggctacaccccagaaccacgcc
gctgcactggcagccaccgcggccgcgtctcatttaacgccaccagcccatgtcgagaga
cagcgacggcagactgccatattgccaggcgtcgagccggcccgcacaccgttggctgca
gaggtgctcgcgacggcctcgaggcgtggccttcaaggtccccaacaagctatgcagcgc
actccaattgcggcggcggggcccggtgtggggccgtcagctgcagccgtgactccagcg
gcaagaatgcaaggggcagcttgtcaagtctctcttccattcgtgcgtgcgcagtgtcaa
aaaggggttacaaagggtaatatatcggctcccaacacaccacaggttctgccgccatgc
gcactccgcgcactggggtccctggcaccattcaacgcaacattcctggcggcttga
DBGET
integrated database retrieval system