Volvox carteri f. nagariensis: VOLCADRAFT_86333
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Entry
VOLCADRAFT_86333 CDS
T01330
Symbol
ssa6
Name
(RefSeq) hypothetical protein
KO
K24886
TOG array regulator of axonemal microtubules protein
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcn03037
]
VOLCADRAFT_86333 (ssa6)
Cilium and associated proteins [BR:
vcn03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
VOLCADRAFT_86333 (ssa6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_2
Cu-oxidase_4
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
9625430
NCBI-ProteinID:
XP_002945898
JGI:
86333
UniProt:
D8TIH8
LinkDB
All DBs
Position
Unknown
AA seq
1524 aa
AA seq
DB search
MTSGEPEAFGFVPAHVVADLQDIGNWKSRATAIDVLHKCLNGVSSPSTLVPALADFVNFL
AGLIADPNFKIAISSMSILGDLAARVGSELGPYLRVVAPALLEKFADSKILVRSATMKLV
RRLMNACTPGAVLAVLGPAISNSNWRVREEVLNTFIMALLSFGPGSYDPVVAYQVLSAGL
SDGKDKVRLVALEGMAVLHSRVSSGELEALMAGQRPGGGGPLPEALRAQVAARLENPALP
GINADGLVEHVVEMPSADNPDMRLADAVFGGGAGAAKAPWTEATNTPARPRLRPAATMDP
PGAGPGSSALGTRPPSLEQVGRLGSDPLPGGRRDGVPLLDTGLGRGGQLALPDEPGVISP
AFRAAGGGGGGGGGGAVPPFVHAHTISRFGSQDPLGGGAPITAAPVLGPNGWGPQPPHPP
HSHPPSQGHPGRPHLDERAASPFRESSGAVAGTGSSDSLQELRGGGGGAGGGGPHGHIAH
GHGHASALQPLKHHWGASRSMESHGLVAGKSPVDSLEDSPLSPSKGGYTVILHGRHSGPA
VTGDGCQRDSLDLLTRPASVRTQAAAELREGARGQPLHAHTHTQAQQPHPPSHPHPQSQS
QQSQQSMVWLQSSLEPESAGTRQETFSPSKAEMLARLKNRQIEKRAATAQQSDASSSSTT
SVAAAAAAEAAAAALAVAMGTAPSPSSSHSVNNPQPAPRRHLFAQTSDPQRTGDRSYPRG
ADAASASSSSRGYDSAASTPTRAMAPSGSPFDDGPSSAQSHRPPRAGAGALAARLGRGAP
VLLQINPQPLLCACPYVFPPPPPAKTHTYTGSYAMPSSLPPGEESPARNPSPSPSPSPAL
NRLRVRSADPTPPLPGSSGAALGPATPTGNGGGGPAAAAAAGPFWEKPRGGVDVSTEELT
PLAEPEKHIRVVISRLVEANHSDRKALDWQGQYEALVDARRLVRHHPEECFTLLGRAMDR
ELDELVPVMLKKAGEVSNAGRDNFLAAEADRTLGEMSRCCGESRCVTALLSCAGHKNPYV
RGKVAFHLDNLLEACAGGGGGRQALSGNTACLERLFRTAAGFLEEGSLDTRTHGKRVIWH
VKSMLASRGEFDRLVAGVTPPGLQRKVVEVVEGLNGPPPPPSRGVVAGGAGGGGGGSWLA
SRQGAAGGSAGGMMMMMMGVGGGGIASPARPLLEQVAGSLTQPPPPVRQGSYSAPSPMHS
GGVTPERRRLPRQRTTDLDGIPETSGGNNSRNNSSNGRSGRLSAGAAAVGPGGPGAVGSA
AGRLRSTASVDGSGSFGFGPGVSEVVVKSLQMLGAKDFRERMDALRAVEGVAAALPGAPD
TLLMQLLDAVVARLGDANAKVSTLALELVAGLSATLRQRMALGLNTLVPALAAALGSAND
KVRSVAGIATEALVGALDPGMLVQHFSHCVANGTLQRGKPLLAEKLVQIVGALYVSKPQL
VARYAVPAAFALLNDGRGGPEAKAAAGVLLAGLARLMGPALLEQASSLSAVAQQRVADAV
AATCHPCRCSHPLRPRCRRRRGRR
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcggagagcctgaggctttcggcttcgtgcctgcgcacgtcgttgctgacctt
caagacatcggcaattggaagtcacgggcgacagccatcgatgtgctccacaaatgcctc
aacggcgtatctagcccctctaccctggtgccggcactcgccgacttcgttaacttcttg
gcggggctcatcgccgacccaaattttaagattgccatatcatccatgtcaattcttggg
gacttggcggcgagggttggcagcgagctggggccctacctcagggtggtggccccggcg
ctcctggagaagttcgcggacagcaagatcctggtccgtagcgcgaccatgaagcttgtg
cggcggctgatgaacgcctgcactccgggcgcggttctggcggtgctggggcccgccatc
tcaaacagcaactggcgtgtgcgggaggaggtgctcaatacgttcatcatggcgcttctt
agtttcggtcctggttcctacgacccggtggtggcgtaccaggtgctgtcggcgggcttg
tctgacggtaaggacaaggtgcggcttgtggcgctggagggcatggcggtgctgcacagc
cgcgtgagcagcggtgagctggaggcgctcatggcggggcagcggccggggggagggggc
ccgctgcctgaggcgctgcgggcgcaggtggcggcgcggctggagaaccccgcgctgccg
ggtatcaatgctgacgggctggtggagcatgtggtggagatgccaagtgcggataatccg
gatatgcgcctggcggatgcggtgtttggtggcggggcaggagccgccaaggcgccgtgg
acagaggccaccaacaccccggccaggccgcggctgcgtccggcagcgaccatggacccc
ccgggtgccgggccggggtcgtcggctctgggcacccggccgcccagcttggagcaggtg
ggccggctggggtcggaccccctccctggtggccgccgcgacggggtgccgctgctggac
actggccttgggagagggggccaactggcgctgccggatgagccgggggtcatcagtccg
gccttccgggcggcgggaggagggggaggaggagggggaggaggagctgtgccgccgttt
gtgcacgcgcacacgatcagcaggttcggttcccaggatcctctggggggcggtgcaccc
atcaccgcggcccccgtgctgggccccaacggctggggccctcagccccctcatcccccg
cactcccacccgcccagccagggccaccccggtcgcccccatctggatgagcgggcggcc
tcacccttccgggagtcctccggggcagtggcgggaactggcagctcggacagcctgcag
gagctgcggggtggcggaggtggagccgggggagggggcccgcatggacacattgcgcac
ggacacggccatgcgagtgcgctgcagccgctgaagcaccactggggggcctcacggtcc
atggagagtcacgggctggtggctggaaagagccccgtagacagcctggaggacagcccc
ctgtccccttccaaggggggctacacagtgatcctgcatggcagacacagcggcccggca
gtcaccggggacggctgccagcgggatagcttggacctgctgacccgacccgccagcgtt
cgcacccaggcggctgcggagctgcgggagggggcccggggacagcccctgcacgcgcac
acgcacacgcaggcgcagcagccgcacccgccctcgcacccgcacccccagtcgcaatcg
cagcaatcgcagcagtcgatggtgtggttgcagagcagcttggagccggagtctgcaggt
acccgtcaggagacgttcagtcccagcaaggccgagatgttggcgcggctcaagaaccgg
cagattgagaagcgggcggccaccgcgcaacagtcggacgcctcctcctccagcaccacc
tcagtcgccgcagcggcagcagcagaggccgccgccgccgccctcgccgtcgcgatgggg
accgctccaagcccatcatcctcccacagcgtcaacaacccgcaaccggccccgcgacgc
caccttttcgcccagacctccgacccgcagcgcacgggcgacaggagttacccccgaggc
gcagatgctgcctccgcctcgtcttcctcccgcggctacgacagcgccgccagcaccccc
actcgggcgatggccccgtcgggcagcccctttgacgacggaccctcttcggctcagagc
caccgaccgccccgggccggggccggggccctggcggcgcggcttggcaggggggcgccc
gtattgttgcaaatcaaccctcaacccctcttgtgcgcctgtccctacgtcttcccccct
cccccccccgccaaaacacacacgtacacaggatcctacgccatgccgtcctccctcccc
ccgggcgaggagtccccggccaggaacccctcaccctcaccctcaccttcacccgcactg
aaccggctgagggtgcggtccgccgaccctaccccccccctaccgggatcatccggtgcc
gcgctgggccccgccacccccactggcaacggtgggggggggcccgccgctgctgcggcc
gccgggcccttctgggagaagccgcgggggggtgtggacgtgagcacggaggagctgaca
ccgctggcggagccggagaagcacatcagagttgtgatctcccggctggtggaggccaac
cactcggaccgcaaggcgctggactggcaggggcagtacgaggcgcttgtggacgcccgg
cggcttgtacggcatcaccccgaggagtgctttaccctcctgggtcgcgccatggatcgg
gagctggacgagctggtgcccgtgatgctcaagaaggcaggggaggtctccaacgcgggc
cgcgacaacttcctcgcggcggaggccgaccgcacgctgggggagatgtcccgctgctgc
ggggagtcgcgctgcgtcaccgcgctgcttagctgtgccggacacaagaacccgtacgtg
cgcggcaaggtggccttccacctggataacctcctggaggcgtgtgctggcggcggcggt
ggccgccaggcgctgtccggcaacacggcctgcctggagcggttgttccgcacagctgcg
gggttcttggaggagggttccctggacacccgcacccacggcaagcgggtgatctggcat
gtgaagtccatgttggcgagccggggggagtttgaccggcttgtggcgggggtgacgccg
ccggggctgcagcgcaaggtggtggaagtggtggaggggttgaatggcccgccgccgccg
ccatctcgcggcgtggtcgctggcggcgccggtggcggtggaggtggcagctggctggcg
tcgcggcagggcgctgctggcggcagcgctggcggcatgatgatgatgatgatgggggtt
ggcggtggcgggattgctagtcctgcgcggccgttgttggagcaggtagcgggcagcttg
acgcagccgccgccgccagtacggcagggcagctactcggcgccgtcgccgatgcactcg
ggcggcgtgacgccggagcggcggcggctgccacgtcagcgcaccacagacctggacggc
attccggagaccagcggcggcaacaacagccgcaacaacagctccaacggcaggtcgggg
cgcctgagcgccggcgccgccgccgttggccctggtgggcccggcgccgttggctccgcc
gccggccgcctgcgcagcaccgccagcgtagacggctccggttcctttggctttggcccc
ggtgtttccgaagtggttgtgaagtcgcttcagatgttgggcgccaaggacttccgggag
cgcatggacgcgctgcgggcggtggagggcgtggcggcggcgctgccgggcgcacccgac
accctgctgatgcagctcctcgacgctgtcgtggctcggctgggcgacgccaacgccaag
gtctccactctggccctggagctggtcgccgggctctccgctacgttgcggcagcggatg
gccctggggctcaacaccctggtcccggcgctggccgcagccctgggctccgccaatgat
aaggtccggtcggtggcgggcatcgccacggaggccctcgtgggggccctggacccggga
atgctggtccagcacttcagccattgcgtggccaacggcacgttgcagcgcggcaagccg
ttgctggcagagaagctggtgcaaatcgtgggggcgctgtatgtgagtaagccgcagctg
gtggcgaggtacgcggtgccggcggcgtttgcgttgctgaacgacggtcgtggcgggccg
gaggccaaggcggcggcgggtgtgttgctggcgggtctggcgaggctgatgggaccggcg
ttgctggagcaggcgtcgtcgttgagtgcggtggcgcagcagcgagtggcggatgcggtg
gcggcgacgtgtcacccttgtcgctgctcccaccctctgcggccccgatgtagacgtaga
cgcggccgccgttga
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