Volvox carteri f. nagariensis: VOLCADRAFT_92606
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Entry
VOLCADRAFT_92606 CDS
T01330
Name
(RefSeq) RWP-RK domain transcription factor
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RWP-RK
HTH_AsnC-type
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
9628327
NCBI-ProteinID:
XP_002952004
JGI:
92606
UniProt:
D8U032
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MFFAAGQMSSSRTGFSSHGSCPGIAHQFFNFCDPPSRQHAAFVNAKGDCVSGPAPYRKNT
WPSAAAPETLSLPHDHSRAIAATISVKSNAGAAATMPVSQLPPHAAAGVDPYQCCKPPQA
PAWDPYPPPPQSLSGMVGRLARSGALAAHPHLHACYGPPASVMVPLPPTAARPPLAPRPP
AGAAPRSGGQAHGPVGMPLSSPSPSHQHQVYPHQPMPPQAGSGAHPVAPPAPSGTYPVSV
PTSVSAPPPPPGVWPWPWSLSQPPPPPPPPPSAAPPQAGSGGGPVTGAGGNGSSGASGWT
ASGPPGGGGSGGGAVGGMCRSGGGSGGSGGWRPEDDEAEDALQELLLEEIAAAPWPHLSP
QQKHLTQSQSANPPQELLLPQLQSQAATDGLLLGPPPISAGGTGMMDVEIGLQSRSDDAL
FAAWLSEMGTGAGAPQAPPGMTSAGSGSGGAAVCWAPPGSTTLTGPTGTAPPPPTGAGAA
QQDSGYNRASFVNSPNSTSMPTTPTVTNAHTGVVPASTIDGSWDGGAGANTGNCAVIGGG
AHTVAASLREQIYGTFDLPVADAARVLGISATELKRRCRRLGISRWPQRKLQSLRRIVQA
AESDAGLSEDERKAVIELAARNREEIMADPDAPLVDLLKTVRQTQYKQSFEKRAAAAAAS
RRAPPPM
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgctgcaggccaaatgagcagctcgcgaaccggattctcaagccatggcagc
tgcccaggcatcgcacaccagtttttcaatttctgtgatccgccgagtcgccagcacgcg
gccttcgtcaacgccaagggtgattgcgtctctggcccagctccttaccggaaaaacaca
tggccttctgcagctgctccagaaacgctcagtctgcctcatgaccacagccgagccatt
gcggctacaatttcggtcaagtcaaatgctggagccgccgcaaccatgccagtctcacag
ctgccaccacacgccgctgcgggcgttgacccttaccagtgctgtaagccacctcaggca
cccgcctgggatccgtatccaccaccgccgcaaagcttatccggaatggtcggccgccta
gccaggtccggcgcccttgcagcgcaccctcatctgcacgcctgctacgggcccccggcc
agcgtgatggtgccgctgccgcccacagccgcgcggcccccactcgcgccgcgcccccca
gctggagccgcaccaagatccggaggccaagcacacggtcccgttggcatgccgctgtcg
tctccgtcaccatcgcaccaacaccaagtgtatccgcaccagcctatgccgccgcaggct
ggctcgggtgctcaccccgtggcaccgccggcaccttccggcacttacccagtgtccgtt
ccgacgtccgtctccgcaccgccgccgcctccgggggtctggccgtggccttggtcactg
tcgcagccgccgccgccgccgccaccgccgccctcagcggcaccgccgcaggcgggtagc
ggcggtgggcccgtcaccggcgctggtgggaacggtagcagcggtgcaagcggctggacc
gcctctggaccgccaggtggtggcggcagcggcggcggcgcggtgggcggcatgtgccgc
agcggcggcggcagcggcggcagcggcggctggcgcccggaggatgacgaagccgaagac
gccctacaggagctgcttctggaagagatcgccgcggccccctggccccacttatcaccg
caacagaagcaccttactcagtcgcagtcagccaacccgcctcaggagctgttattgccg
caattgcagtctcaggcagccaccgacggcttactgctgggcccgcctccgatatctgcc
ggcgggacgggtatgatggatgtggagataggtcttcagtctcgaagcgacgacgccctg
ttcgctgcatggcttagtgagatgggcacgggagccggggcaccccaagcgccgccgggt
atgaccagcgctggctcaggcagcggcggtgcggcggtctgctgggcgccaccaggctcg
actacactcacaggcccgacgggcacagcaccgccgcctccaacgggcgcaggggctgcg
caacaggacagtggttacaaccgggcatccttcgtcaattctcccaactccacgagcatg
ccaaccactccaaccgtcacgaacgcgcataccggtgttgtccctgctagcaccatcgac
gggagctgggacggcggcgccggtgcgaacactggcaattgcgctgtcatcggcggcggc
gcgcacacagttgctgccagcctgcgcgagcagatctacggcacattcgacctcccagtt
gccgacgctgcgcgtgtgcttggtatcagcgcgacggaactcaagcgcaggtgccggcga
ctgggcatttcacgctggccacaacgcaagctgcaaagcctgcggcggatcgtgcaggct
gcggagtccgatgcgggattgtccgaggatgaacgcaaggccgttattgagcttgcggct
cgcaaccgtgaggaaatcatggctgatccagacgctccattagttgacctcctgaagacg
gtccggcagacacagtacaagcagtccttcgagaaacgtgctgccgcagccgctgctagc
cgccgcgccccgccgcctatgtaa
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