Vibrio cholerae O1 O395: VC0395_0222
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Entry
VC0395_0222 CDS
T00520
Name
(GenBank) transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VC0395_0222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vco03000
]
VC0395_0222
03400 DNA repair and recombination proteins [BR:
vco03400
]
VC0395_0222
Enzymes [BR:
vco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VC0395_0222
Transcription factors [BR:
vco03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VC0395_0222
DNA repair and recombination proteins [BR:
vco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VC0395_0222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ABQ19016
UniProt:
A0A0H3AGF3
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All DBs
Position
1:257603..258961
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AA seq
452 aa
AA seq
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MTLLNELSAEVCQRARMSRDPRFDGRFFVAVKTTGIFCRPICPANLPKEENVEYFSSQAL
AVSAGYRPCLRCRPESAPHSWAWKGAETSFLRALTLIEQGELDGSLETLASRLGISDRYL
RQLFQRHLGMPPKQYAQIQQLMFAKQLLHTSQISITEVAYASGFQSTRRFNDAFQKLFRL
TPTQVRRERAALPSRNHLSLAFRGPFDWAHMLDFYRLRAIEGMELIDEQSYQRHFVLGEG
TGWFKASMAQSHLDIEFEMERLSDLRHLVARLRRMFDLDADLISIEAHLEQLAPGLVRRT
GIRIPGVWNAWEAGVRAVLGQQVSVKAAIGQLNLLVSTLAASEGSTRYFPTPEQVQMSDL
SFLRMPERRKETLKRLADYVRLHPMDSPMAWLSLSGIGPWTVDYAQLRGESRSHCFLTGD
LIVKKALAKFPQLTAESVAPWGSYATFHCWSH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacattgcttaatgaattatccgcagaggtgtgccaacgcgctcggatgagccgagat
ccacggtttgatgggcgtttttttgttgcggttaaaaccacagggattttttgccgcccg
atttgcccagccaacctaccgaaagaagagaatgttgagtatttttcctcgcaagcgtta
gcggtatcggcgggctaccgaccttgtttgcgctgccggcctgaaagcgctccccattca
tgggcgtggaaaggagccgaaacctcatttctacgtgccttgactctgattgagcaggga
gagctggacggcagtttagagactttagcctcacgcttaggtatcagtgaccgttatctg
cgccagctttttcagcgtcatttaggaatgccgcctaaacaatatgcgcagatccagcag
ctcatgtttgccaaacaattactgcatacgagccaaatttcgattaccgaagtggcttac
gccagtggatttcagagcacccgccgttttaatgatgcgttccaaaaattatttcggttg
acgccgacccaagttcggcgagaacgagccgctcttccttctcgaaatcatctgagctta
gcttttcgcggcccttttgactgggcgcatatgttggatttttatcgtctgcgagcgatt
gaaggcatggagctgatcgatgaacagagctatcaacgtcattttgtccttggtgaaggt
acaggatggtttaaggcgagcatggcacagtcgcacttagacattgagtttgagatggag
cgtttgagtgatcttcgccacttagtcgctcggctgcgacgaatgtttgatctcgatgca
gacctgatcagtattgaggctcatttagagcagttagctccgggattggtacggcgcacc
gggatccgtatccccggggtatggaatgcatgggaagcgggagtgcgcgcagtgctcggt
caacaagtttcagtcaaagccgcaattggacaattgaacttgttagtctccacgctggcg
gctagcgaagggtcaacacgttatttcccaaccccagaacaagtgcaaatgagcgactta
agctttttacgtatgccggaaaggcgtaaggaaaccttaaaacgtttggcggactacgtc
cggttgcatcctatggattcgccaatggcatggttatcgctaagcgggattggtccttgg
actgtcgattacgcgcaattgcgcggtgaatcacgtagccactgttttttaaccggagat
ttgatcgtgaaaaaagcactggcgaaatttcctcagttaactgccgaatcggtcgcccct
tggggcagttatgccacttttcattgctggagccactaa
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