Vibrio coralliilyticus RE98: IX92_01740
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Entry
IX92_01740 CDS
T03444
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcy03021
]
IX92_01740
Transcription machinery [BR:
vcy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IX92_01740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AIW17825
UniProt:
A0A7Y4GJ31
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All DBs
Position
1:356298..356876
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AA seq
192 aa
AA seq
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MNEQLTDQVLIERVQNGDKQAFNLLVTKYQNKVCNLISRYVNNPGDVPDVAQEAFIKAYR
AIPSFRGESAFYTWLYRIAVNTAKNHIVAQGRRPPAQDVDTEEAEYYETGSALKEISNPE
NLTLSKELKQVVFSAIEALPDDLKTAMTLRELDGLSYEEIAAVMDCPVGTVRSRIFRARE
AVEKKIQPLLQR
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagctgaccgatcaagtgttaattgagcgagttcagaatggagataagcaa
gcatttaatttgttggtcactaaataccaaaacaaagtatgtaatcttatttctcgctac
gtcaataatccgggggatgtacctgacgtagcacaagaagcatttattaaagcgtatcgc
gctataccaagttttcgtggcgaaagtgccttctatacttggttatatcgaatcgctgtt
aatactgcgaaaaaccacatcgttgctcagggtcgtagaccgcctgcgcaagatgtggat
actgaagaagctgaatattacgaaactggtagtgcattaaaagaaatttcgaaccctgag
aacttaacgttgtccaaggaattgaagcaagtagtttttagtgcgatcgaagcactacct
gatgacttaaaaaccgcaatgacgttgcgcgagcttgacggcttgagttacgaagaaatc
gctgcggtgatggattgtcctgttggaacggtgcgttcgcgtatcttccgagctcgtgaa
gcggttgagaaaaagattcaaccccttttgcaacgctag
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