Vibrio sp. EJY3: VEJY3_01265
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Entry
VEJY3_01265 CDS
T01683
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VEJY3_01265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vej03400
]
VEJY3_01265
Enzymes [BR:
vej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VEJY3_01265
DNA repair and recombination proteins [BR:
vej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VEJY3_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
PriA-like_WH
AAA_30
Zot
AAA_19
zinc-ribbons_6
TrwB_AAD_bind
HypA
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AEX20751
LinkDB
All DBs
Position
1:complement(286490..288694)
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AA seq
734 aa
AA seq
DB search
MRPSIARVALPVPLDKQFDYAIPGHLFPIIGGRVSVPFGRQTLVGIVTAMVNHSDFPKEQ
LKPIKAVLDSQPIWSEKLYSLLTWCSHFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQ
ITEAGKDKLMQGLDRRAVKQQKVLQILVDGAVPHQEIVEQEIASTVLKSVEEKGWIERIE
KMPTISNWPQQVENDVDKPKLNHEQALAIASVNSQSGFACYLLEGVTGSGKTEVYLNLIK
PVLEKGRQALVLVPEIGLTPQTINRFKHRFKVPVDVIHSGLNDTERLNAWLSAPDKAAGI
IIGTRSALLTPFADLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATP
ALETLHNALTGKYHHLTLTQRAGSAVPTTNKVLDVKGQYLESGLSAPLIAEMRKHLKAGN
QVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVIHQCQGC
GSTQLVTVGVGTEQLEHQLAQLFPEYKAIRIDRDSTRRKGSLEDALESIRKGEFQILIGT
QMLAKGHHFPNVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVILQTH
HPEHSLLQALLQKDYRHFAMTALEERKLAQLPPYSYLTLFKAEANQSEVVEDFLRQVRFT
LESHPLFDDTCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAK
KVRWNLDIEPQDLS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccatccattgccagagtggcattacccgttccactcgacaaacagtttgattat
gccatcccggggcacctgttcccgatcattggtgggcgcgtttccgtaccttttggacgc
cagaccttagtaggcatcgttactgcgatggtgaatcactctgattttcctaaagagcag
cttaaaccaattaaagccgtattggactcacaacctatctggtcagaaaagctgtattca
ttgctcacatggtgtagccatttttatcagtatccattgggcgatacgcttcacaatgca
atgccagcagcgctgagaaaaggaaaaccagccgattttgccaccttgcaggaatggcag
atcaccgaagcgggtaaagacaaactgatgcaaggacttgatcgtcgggccgtgaagcaa
caaaaagttctgcaaatcctggtagatggagccgtgccgcaccaagagattgtagagcaa
gagatcgcctcaacagtgctgaaatcggtcgaagagaaaggttggattgagcgaattgag
aaaatgccaacgatttcaaactggcctcagcaagtcgaaaacgacgtcgacaaacccaaa
cttaaccatgagcaggcgttagctatcgccagcgtcaatagccaaagtggttttgcctgc
tatttattagagggagtaacaggctctggtaagaccgaggtttacctcaatctgatcaag
ccagtgttggaaaaaggacgacaagcgttagttctggtgccagagataggcctgacacca
caaactatcaaccgctttaagcaccgctttaaagtgccggttgatgttatccactcagga
ttgaatgataccgaacgtttaaacgcttggttatcggctcctgataaagcggcgggaatt
atcattgggacacgctccgccctactgacgccatttgctgatctcggcattattattgtc
gacgaagaacacgactcttcatataaacaacaagacagtttgcgctaccacgctcgtgat
gttgctgtaatgcgtgcgcacaaagagcaagtgcctattgtgttgggctctgcgactccg
gctcttgaaacgctgcacaatgcgttgacgggtaaatatcatcacctgacattaacccag
cgagcaggctctgcggtgccaaccactaataaagtactcgacgtaaaaggtcagtattta
gaaagtggattgtctgcgccactgattgctgaaatgcgtaaacacctaaaagcgggcaat
caggtgatgctgtttcttaaccgccgaggtttctccccagccctaatgtgccatgaatgt
ggctggatagccgagtgtaaacgctgtgatgcctactacaccttccatcaatacagtaac
gaaatacgctgccatcattgcggctcacagcagcctgtaattcatcagtgtcagggatgt
ggttccactcagttagtaacggtcggtgtcggcactgagcagttagagcatcaattggcg
caactcttcccagaatacaaagccattcgtatcgacagagacagcacccgccgtaaaggc
agcttagaagatgcccttgaatcaattcgtaaaggtgagttccagattttaattggtacc
cagatgctggctaaaggacaccacttccccaacgtaacgctggttgccttgttggatgtg
gatggctctttatacagtagtgatttccgggcttctgaacgcctcgcgcagctttttatt
caggttgcaggcagggctggtcgtgcgagtaagcctggagaagtaattttgcagactcac
caccccgagcacagtttgttacaagcattgctgcaaaaagattaccgccactttgccatg
accgcattagaggagcggaagttagcgcaactacctccctacagttacctgactctattt
aaagcagaggcaaaccaaagtgaggtagtcgaagacttcctgcgccaagttcgttttacg
ctggagtctcacccactgtttgacgacacttgtatggtacttggcccgaccccctcgcct
ttggctaaacgggcaggcaaatatcgctggcaactcttgctgcaaacccaacaccggtca
ttaatgcaaaagttattaaccagtgccaaacctgctattgagttgttacctaatgccaag
aaagtacgttggaatttagacatagaaccacaggatctcagctag
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