Aliivibrio fischeri ES114: VF_1641
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Entry
VF_1641 CDS
T00236
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfi03032
]
VF_1641 (topB)
Enzymes [BR:
vfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VF_1641 (topB)
DNA replication proteins [BR:
vfi03032
]
Prokaryotic type
DNA Topoisomerases
VF_1641 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
FYRC
CPSF100_C
Motif
Other DBs
NCBI-ProteinID:
AAW86136
UniProt:
Q5E4B0
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All DBs
Position
I:complement(1844249..1846219)
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AA seq
656 aa
AA seq
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MLFTTSAFFMSRLFIAEKPSLGRAIAAGLAKPQKNQQGYIECGNGDIVTWCIGHLLEQVE
PDAYDDKYKSWRMEHLPIVPDQWQLRPRKASSKQLTVIRKLLKNATQIVHAGDPDREGQL
LVDEVLDYLKLSKTKKAATQRLLISDLNLPAVKRALTSMRSNQEFIPLSISALARSRADW
LYGMNMTRAYTLLGQRGGYQGVLSVGRVQTPVLGLVTRRDEEIANFVPKAYYTLDALIPY
QNDQLNDGVPFDIRAKWKPSDACQPWQDEEGRVLNLKLVENVAQRIANQPATVTKAENKE
TKQNAPLPYSLSSLQIDAAKRYGLSAQQVLDACQALYEKHKLITYPRSDSRHLPKDHYKQ
REQVCAAIGNNDKQLSTAVTKADFSLKSRAWNDSKVDAHHAIIPTPKSSSSAGLSGYEEK
VYHLIARQYLMQFYPAAVYAEAELVFDIAGGVFVAKGKQMLFAGWRVLLGKVQSQNSDDD
VASKVPPLSKGEVHTCREGEIKHRMTEPPKHFTEATLLQAMTGIARFVEDKELKKILRDT
DGLGTEATRAGILDTLFKRQLLTRNGKSIHASEAGRGLIHALPNEATYPDMTAHWEFQLQ
GMTEKTHAYRPFMSELEIKVTNFMQGVQQGPVPESLRTLKSPAKPQFKRKRKAKKS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgttattcacaacatcagcattttttatgtcacgattatttattgccgaaaaaccaagc
cttggcagagcgattgccgcaggcctagcaaaaccacaaaaaaaccaacaaggttacatc
gaatgcggcaatggagatattgtgacatggtgtattggtcacctattagagcaagttgaa
cccgatgcatatgatgataaatataaatcatggcgtatggagcatttacctatcgtgcca
gatcagtggcaacttagaccaagaaaagcctccagtaagcaattaacggtaattcgaaag
ttgttaaaaaatgcaacgcagatcgttcatgcgggagaccctgatagagaaggtcagtta
ctggtggatgaggtgttggattatttaaaattatctaaaacgaaaaaagcggcgactcaa
cgcttattgatcagtgatttaaacctgccagcggtgaagcgtgcgttgacttctatgcga
agtaatcaagagtttattcctctctctatttcggccttagcacgctctcgtgccgattgg
ttatatggtatgaatatgacacgtgcttacacgttattaggtcaacgaggtggttatcaa
ggagtattatcagtaggaagagtacaaactcctgttttaggtttggttactcgccgtgat
gaagaaattgctaattttgtaccaaaggcgtattacacgttagatgctcttatcccttat
caaaatgatcaattaaacgacggtgttccttttgatatcagagcaaaatggaagccgagt
gatgcatgccagccatggcaagatgaagaaggacgagttcttaatcttaaactggttgaa
aatgtcgctcagcgcatagcgaatcaaccggcgacagtaactaaagctgaaaataaagaa
accaaacaaaatgcgcctttgccatattctttgtcatcgcttcaaatcgatgcggcaaaa
cgttatggactaagtgcacagcaagtgctagatgcgtgtcaggcattatatgaaaagcat
aagttaataacctatccacgttcagatagtcgtcatttaccaaaagaccattataaacag
cgtgagcaagtgtgtgctgcgataggaaataatgataagcaattatcaacagctgttaca
aaagccgacttttcattgaaatcgcgagcttggaatgacagtaaggtggatgctcaccat
gctattattccaacaccgaaatccagtagttcagctggcttatctggctatgaagagaaa
gtgtatcatttgattgctcgtcaatacctaatgcaattttatcctgctgcggtttatgct
gaggctgaattggtgtttgatattgctggtggggtgtttgttgcaaaaggaaagcaaatg
ctgtttgctggctggagagttctgcttggcaaagtgcaatctcaaaacagtgatgatgat
gtagcgagtaaagttccgccattatcaaaaggtgaggttcacacttgtcgagaaggtgaa
ataaaacatcgcatgacagagccgccaaaacattttactgaggcgacgcttttgcaagca
atgacaggtattgcacgctttgtggaagataaagaactgaaaaaaatactaagagatacg
gatggtctgggaaccgaagcgactcgtgcgggtattttagatacattatttaaacgtcag
ttattaactcgaaatggaaagtccattcatgccagtgaagcaggtagagggcttattcat
gctttaccaaatgaagcaacttacccggacatgaccgctcattgggaatttcagcttcaa
ggtatgacagagaaaacacacgcttatcgaccttttatgtcggaattagaaataaaagtg
actaattttatgcaaggtgttcagcaaggcccagtaccagagtcattaagaacattaaaa
agtccagctaaaccacaatttaaacgtaaaagaaaagcaaagaaatcttaa
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