Aliivibrio fischeri ES114: VF_A0872
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Entry
VF_A0872 CDS
T00236
Symbol
tcpC
Name
(GenBank) toxin coregulated pilus outer membrane protein TcpC
KO
K10932
toxin coregulated pilus biosynthesis outer membrane protein C
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi05110
Vibrio cholerae infection
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05110 Vibrio cholerae infection
VF_A0872 (tcpC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vfi02044
]
VF_A0872 (tcpC)
Secretion system [BR:
vfi02044
]
Type II secretion system
Toxin co-regulated pilus biosynthesis protein
VF_A0872 (tcpC)
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Gene cluster
GFIT
Motif
Pfam:
Secretin
Motif
Other DBs
NCBI-ProteinID:
AAW87942
UniProt:
Q5DZ54
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All DBs
Position
II:complement(983724..985178)
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AA seq
484 aa
AA seq
DB search
MKKKALILIISILSGCSSTNMSDKNENSLDLIVDKEIESRNLRTSNFSIFDNSYYSVYEN
NNDSKNKDIPVSFYSVEPMTIYEVLDIIELQFKMPYYMSDILSLTEEEKKLYNDRKKITF
DGSLDNFFKYLGKVYGLDIVVDDFDALKVSYFQTKMYSLDQFIDGNKSSASLSVGSGATS
GGFSASSESSVESDTWEKIENYLDDVVGENGSSTILEDFSLVKITARPWIISEVDQLFDR
LKAESQMQVSVQYRIISLSKSKLSQLAAKFGLDSKGNDFTITSELVDSVALNAAGGGLSF
AKRSVSGRLDAVVKYLAQDVVSEGHFVGLPNRIMPINLTTTSSYISEVEKVDNENVDKST
TSLKTSEIKTGLSMLILPKVLEDGRIQLTSGFTKKQLIAMDTVSGVQLPTVDENETLSTV
TLDSGDVELITLYKGNSNNSAQAAQLLGLGQTSSEDDQVIAVLIGADSYKLASSVSKRGL
YDNR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaagcattgattttgattatatctatattatctggatgctcttcaactaat
atgagtgataaaaatgagaactcattagatcttatagtggataaagaaatagaatctcgt
aacttgagaacatctaatttctcaatttttgataattcatattattccgtttacgaaaat
aataatgattcaaaaaacaaagatattccggtaagtttttatagtgttgaaccaatgacc
atttatgaagtactagatatcattgaattacagtttaaaatgccttactacatgtccgat
attctttctttaactgaagaagagaagaaactctacaatgacagaaaaaaaataacattt
gatggtagcttagataatttttttaaatatctaggtaaggtttatggtctggatatcgtt
gttgatgacttcgatgctttaaaagtcagttattttcaaacaaagatgtatagcttagac
caattcattgatggtaacaaatcttcggcttctctttctgtcggcagtggtgctacctct
ggtggtttttctgcttcatctgagagttctgttgaaagtgatacttgggaaaaaattgaa
aattatttagatgatgtagtcggagaaaatgggagttcaactattttagaagacttttcc
cttgttaaaattactgctaggccatggattatctcagaagtcgatcaattatttgataga
ttgaaagctgagagtcaaatgcaagtttctgtacaatatcgaattatcagtttaagcaaa
tcaaaattgagtcaattagctgcgaagtttggtttagattcaaaaggtaatgactttact
ataacgagtgaattggttgattctgtcgcacttaatgctgctggtggtggattaagtttt
gcgaaaaggtctgtaagtggaagactagatgcagtagtcaaatatttagctcaagatgtc
gttagtgaaggccatttcgttggattaccaaataggattatgccgataaatctaactaca
acctcatcgtatatttctgaagtagaaaaagtagataatgaaaatgtagataagtcaact
acatcattgaaaacgtctgaaattaaaactggcttgagcatgttgattttaccaaaagtt
ttagaggatggtcggattcaattaacatctggttttactaagaagcagttgatcgcgatg
gatactgtaagcggcgttcaattaccaacagttgatgagaatgaaacattatcaacggta
actttagattcaggagatgtggaattaataaccttatataaaggaaattctaataattca
gctcaagcagctcaattacttggtttaggtcaaacttcatctgaagacgatcaagtaatc
gcggtactaattggtgcggatagttacaaactagctagctctgtctcgaaacgaggatta
tatgataatagatga
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