Vibrio fluvialis: AL536_09240
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Entry
AL536_09240 CDS
T04379
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vfl
Vibrio fluvialis
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfl01011
]
AL536_09240
Enzymes [BR:
vfl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AL536_09240
Peptidoglycan biosynthesis and degradation proteins [BR:
vfl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AL536_09240
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
Pilus_CpaD
ExoX-like_C
DUF3324
Motif
Other DBs
NCBI-ProteinID:
AMF93709
UniProt:
A0A0X8LKM7
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All DBs
Position
2:complement(356839..358401)
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AA seq
520 aa
AA seq
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MRVQFSWVIALLLAGCQLTQPLSQNTSETNEENTPAPQVTTPTKTKKTPVVVQPKVLTPQ
EQQDVWQRIAMQLQLPIPEDKTVDYYRTWYIKHPGHLETVAKRAEPFLYLITEKIEQRNL
PLELALLPIVESAFDAFAYSHGSAAGLWQFVPGTGKMYGLEQNFWYDGRRDVDAATDAAL
DYLTYLSNRFDGDWYNAIAAYNSGGGRVSSAIRKNTSQGKPTDFFSLDLPQETSGYVPKL
LALADIIANQERYGVSLPAIANKPVLKLVDPDEQLDLAIAANYAGISVKELQSYNPAYNQ
WATAPDGPFQLLLPIDKVERFEQQVEANRGKGMKLVRYKVQNGDTLSVIATKHSTTTKVI
QTANNLSGTSIRVGQYLMIPTSVKDEKAYALSASNRLAKTQSLARGKYKLTHTVRPGDSL
WTIARANNVSHQALAKWNGMGPRDTLRVGQKLVIWKDSTDGAIIRTVFYQVRNGDTLSDI
AARFSVKTHDIVKWNDLANQKYLKPGQKLKLYVDVTKVSV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtacaattcagctgggtaattgcactactattagccggatgccaacttacccag
cccttgagtcaaaatacatcagagaccaacgaggaaaacaccccagcaccccaagtgaca
acaccgaccaaaacgaaaaaaacaccggtcgttgtccagccaaaagtgctgactcctcag
gaacaacaagacgtatggcaacgcattgccatgcagcttcagctcccgatcccggaagac
aaaaccgtcgactactaccggacgtggtacatcaaacacccaggtcatttggaaaccgtc
gccaagcgcgccgaaccttttctgtatctgatcacagagaaaatcgaacaacgcaatctg
ccactcgaactggcactgctgccaattgttgagagcgcctttgatgcttttgcttattcg
cacggcagcgctgcggggttatggcagttcgttccgggcaccggaaaaatgtacggactg
gaacaaaacttctggtacgacggccgccgcgatgtggatgccgccaccgatgccgcgctt
gattacctgacgtacctcagcaaccgttttgacggcgactggtacaacgccatcgcggct
tataacagcggtggaggccgagtttccagtgccattcgcaaaaacaccagtcagggtaag
ccgaccgatttcttctcgcttgatttaccccaagagaccagtggttatgtgccgaaactg
ctcgcgcttgcagacatcattgccaatcaggaacgttatggtgtctcacttcctgcgatt
gccaataaaccagtgctgaaattggtggatccggacgagcagttggatctggcgatcgca
gccaattacgccggtatcagcgtgaaggagctgcaaagctacaatccggcttacaaccaa
tgggcaactgcaccagacggacctttccaactgctgctgcccatcgacaaggtcgagcgt
tttgagcagcaagtcgaagccaaccgtggcaaaggcatgaagctggtacggtacaaagta
caaaacggtgatacgctgagtgtgattgcaacgaaacactccacgaccaccaaagtgatt
cagaccgccaacaatctgtccggcacctcaattcgcgtcggtcagtacctcatgattccc
acctccgtcaaagatgagaaagcctatgcgctgagcgcgagcaatcgtctggccaagact
caatcattggcgcgcggaaaatacaaactcacgcataccgtacgcccgggtgacagtctg
tggaccatcgctcgagccaacaatgtctcccatcaggccttagccaaatggaacggaatg
ggcccgcgtgacacgctgcgtgttggacaaaaactggtgatttggaaagacagcaccgat
ggtgccatcatccgtaccgtgttttatcaggtacgtaatggcgatacgctgagtgacatt
gcggcacgctttagcgtcaaaacgcacgatatcgtcaaatggaatgatctggccaaccag
aagtatcttaagccgggtcagaaactgaaactgtacgtcgatgtgactaaggtcagtgta
tga
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