Vibrio fluvialis: AL536_16775
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Entry
AL536_16775 CDS
T04379
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
vfl
Vibrio fluvialis
Pathway
vfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL536_16775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vfl03019
]
AL536_16775
03110 Chaperones and folding catalysts [BR:
vfl03110
]
AL536_16775
03029 Mitochondrial biogenesis [BR:
vfl03029
]
AL536_16775
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vfl04147
]
AL536_16775
Messenger RNA biogenesis [BR:
vfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AL536_16775
Chaperones and folding catalysts [BR:
vfl03110
]
Heat shock proteins
HSP70 / DNAK
AL536_16775
Mitochondrial biogenesis [BR:
vfl03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
AL536_16775
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
AL536_16775
Exosome [BR:
vfl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AL536_16775
Exosomal proteins of breast cancer cells
AL536_16775
Exosomal proteins of colorectal cancer cells
AL536_16775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
HSP20
GIT1_C
RNA_pol_Rpb1_6
Motif
Other DBs
NCBI-ProteinID:
AMF95089
UniProt:
A0A0X8LNA1
LinkDB
All DBs
Position
2:complement(1970230..1972140)
Genome browser
AA seq
636 aa
AA seq
DB search
MGKIIGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGETLVGQPAKRQAVTN
PENTLFAIKRLIGRRYEDEEVQRDISIMPYKIVRADNGDAWVEAKGQKMAAPQVSAEVLK
KMKKTAEDYLGEKVTGAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL
DKQGGDRVIAVYDLGGGTFDISIIEIDEVEGEKTFEVLATNGDTHLGGEDFDNRMINYLV
DEFNKEQGINLKNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVT
RAKLESLVEDLVQRSLDPLKVALADADLSVSDITDVILVGGQTRMPMVQKKVAEFFGKEA
RRDVNPDEAVAVGAAVQGGVLAGEVKDVLLLDVTPLSLGIETMGGVMTKLIEKNTTIPTK
ANQVFSTAEDNQNAVTIHVLQGERKQANFNKSLGQFNLEGIQAAPRGMPQIEVTFDLDAD
GILHVSAKDKQTGKEQNITIQASGGLSDEEIEKMVQEAEANKEADKKFEELATARNQADQ
MIHATRKQVEEAGDALPADEKEKIEAAISELETAKRGEDKAEIDAKVQALMTASQKLMEI
AQQKAQAQGADAGQQSTSPEDDVVDAEFEEVKDDKK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaatcattggtattgacttaggtactactaactcatgtgttgctgtgctagac
ggcgacaaacctcgcgtaatcgagaacgcagagggtgagcgtacaaccccttctgtaatc
gcgtacacagatggtgaaacgctagttggtcagccagcgaaacgtcaagctgtaacaaac
ccggaaaacacgctatttgcaatcaagcgtcttatcggtcgtcgttatgaagacgaagaa
gtacagcgtgacatctcaattatgccttacaagatcgttcgtgcagacaacggcgatgcg
tgggtagaagcgaaaggccaaaaaatggctgcgccacaggtttcagcagaagttctgaag
aaaatgaagaaaactgcggaagattacctgggcgagaaagtaacgggtgccgttatcacc
gttcctgcttacttcaacgatgcgcagcgtcaggcaacgaaagatgccggtcgtatcgca
ggtcttgaagtaaaacgtatcatcaacgaaccgactgctgctgcactggcttacggtctg
gacaaacagggcggcgatcgcgttatcgcagtatacgacctgggtggtggtacatttgat
atttcaatcatcgaaatcgatgaagttgaaggcgagaaaaccttcgaagttctggcaacc
aacggtgatactcacctgggtggtgaagacttcgataaccgcatgatcaactacctggtt
gacgagttcaataaagaacaaggcatcaacctgaagaacgacccactggcgatgcagcgt
ctgaaagaagcggcagagaaagcgaagatcgaactgtcttcagctcagcaaactgatgtg
aatctaccttacatcactgctgatgcaaccggtcctaagcacatgaacatcaaagtgact
cgtgcgaaactggaatctctggttgaagacctggttcaacgttctctggatccactgaaa
gtggctctggctgatgcagacctgtctgtcagcgacatcactgacgttatcctggtgggt
ggtcagactcgtatgccaatggttcagaagaaagtggctgaattctttggtaaagaagca
cgtcgtgacgtgaaccctgatgaagcagtagctgttggtgctgcggttcaaggtggcgta
ctggcgggtgaagtaaaagatgtactgctgctggacgtaactccgctgtctctgggtatt
gagacaatgggcggcgtaatgaccaaactgattgagaaaaacaccacgattccaaccaaa
gcgaatcaagtgttctcaacagccgaagacaaccagaacgcggtaacgattcacgtactg
caaggtgaacgtaaacaagcgaacttcaacaagtcgctgggtcagttcaacctagaaggc
attcaggcagcaccacgtggtatgcctcagatcgaagtgacgttcgacctggatgcggat
ggtatcctgcacgtatcagcgaaagacaaacaaactggtaaagagcagaacatcactatc
caagcgtctggtggtctgagcgacgaagaaatcgagaaaatggttcaggaagcagaagcg
aacaaagaagcggacaaaaagttcgaagagctagcaactgcacgtaaccaagctgaccag
atgatccacgcaactcgtaagcaggttgaagaagcgggtgacgctctgccagcagacgag
aaagagaagatcgaagcggcgatcagtgagctggaaacagcgaaacgcggcgaagataaa
gcagaaatcgatgcgaaagttcaagcactgatgactgcttctcagaaactgatggaaatc
gctcagcagaaagctcaggcacaaggtgctgacgctggccagcagtctacttctccagaa
gatgacgtggttgacgccgagtttgaagaagtgaaagacgacaagaaataa
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