Aliivibrio fischeri MJ11: VFMJ11_2560
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Entry
VFMJ11_2560 CDS
T00754
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vfm
Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfm03016
]
VFMJ11_2560 (trmA)
Enzymes [BR:
vfm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
VFMJ11_2560 (trmA)
Transfer RNA biogenesis [BR:
vfm03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
VFMJ11_2560 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_15
MTS
Methyltransf_4
Methyltransf_11
Cons_hypoth95
Methyltransf_31
Methyltransf_12
PrmA
DREV
Motif
Other DBs
NCBI-ProteinID:
ACH67360
UniProt:
B5FCA6
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All DBs
Position
I:2743944..2745050
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AA seq
368 aa
AA seq
DB search
MTQSVMNPENYQVQLDEKAEALSAMFSEFNVPELEVFSSPAENYRMRAEFRVWHEGDEMY
YVMFNQETKEKYRVDYFLPASRLINDLMPLLTEAVKESKTLRYKMFQVDFLSTLSGEILV
SMLYHRQLDDAWKEEAKALKQRLNDEGFNLNIIGRARKMKIVLDQEFVIEKLKVNDDILT
YKQVENSFTQPNGIVAQKMLEWAVDCTQNSQGDLLELYCGNGNFSLALAKNFDRVLATEL
AKPSVDSAQYNIAANNIDNVQIIRMSAEDFTDAMEGKREFRRLKDQNIDLKSYNCNTIFV
DPPRSGMDEGTCKMVQGYERIMYISCNPETLKENLEILSQTHNITRFALFDQFPYTHHME
AGVFLERK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacacaatcagtcatgaacccagaaaattatcaagtacaattagatgaaaaagcagaa
gcactctctgctatgttttctgaatttaatgttccagaactggaagtcttttcctctcct
gctgaaaactaccgcatgcgtgcagaatttcgtgtgtggcatgaaggtgacgaaatgtat
tacgtcatgttcaaccaagaaaccaaagaaaaataccgtgttgattacttcttacctgca
agccgtttaattaacgatttgatgccattactaacagaagcagtaaaagaaagtaaaaca
cttcgctataaaatgttccaagtggatttcttatcgacgcttagtggtgaaattttggtg
tcgatgctttatcaccgtcaactagatgatgcttggaaagaagaagcgaaagcattaaaa
caacgtctgaatgatgaaggttttaacctaaatatcattggtcgtgcacgtaaaatgaaa
atcgttttagaccaagagtttgttattgaaaaacttaaagttaatgacgacatcttaacg
tataagcaagttgagaatagctttacacaaccaaacggcattgttgctcaaaaaatgctg
gaatgggcagtggattgtacacaaaacagtcaaggcgacctacttgaattatattgtggt
aacggtaacttctcattggcattagcgaaaaactttgatcgcgttctggctaccgaatta
gcaaaaccatctgttgattctgctcaatacaacattgctgcaaataacattgataatgtg
caaatcattcgaatgtctgctgaagattttactgatgctatggaaggtaaacgtgaattt
agacgcttaaaagatcaaaatatcgatctaaaaagctataactgcaacactatctttgtt
gatccacctcgttctggaatggatgaagggacttgtaagatggttcaaggttacgagcgt
attatgtacatctcttgtaatcctgaaacgctaaaagaaaacttagaaattttaagccaa
acgcacaacattacgcgttttgctttatttgaccagttcccatatacacaccatatggaa
gcaggcgttttcttagaaagaaaataa
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