Variibacter gotjawalensis: GJW-30_1_00118
Help
Entry
GJW-30_1_00118 CDS
T05320
Symbol
ykoV_1
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GJW-30_1_00118 (ykoV_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_00118 (ykoV_1)
DNA repair and recombination proteins [BR:
vgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GJW-30_1_00118 (ykoV_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BAT57611
UniProt:
A0A0S3PNW0
LinkDB
All DBs
Position
143023..143826
Genome browser
AA seq
267 aa
AA seq
DB search
MPPRSFWKGYLKLSLVTCPVAMVPATTDNEKVRFHTLNRKTGNRVVSQYVDSETGKPVDQ
DNEVRGYERAENEYVQLEDDEIDAVALESTRTIDIDMFVPRESIEWIWYDKPHYLTPDDP
VGEEAFSVIRDAMAATNMVGISRLVMYRRERAVMLVPRDNGIVLWTLRYGEEVRDPNAYF
GDMKSSKPDSKLMPLVKQLIDERTKEWTPKMVDDPVQDRLLDIIADKQKGKKRSAKTKAA
PAPETSGNVINIMDALKKSIAAGAKKK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgttcattctggaagggctacctcaagctgtcgctcgtgacctgcccggtc
gcgatggtgcccgcgacgacggacaacgaaaaggtccgcttccacacgctgaaccggaaa
accggcaatcgtgtcgtcagccaatacgtcgactccgagacgggaaagcctgtcgatcag
gacaacgaagtgcgcggctatgagcgcgccgagaacgaatacgtccagctcgaggacgac
gagatcgatgcggtcgcgctcgagagcacgcgcacaatcgacatcgacatgttcgtgccg
cgcgagagcatcgagtggatctggtacgacaaaccgcactatctcacaccggacgatcca
gtcggcgaagaggcgttttccgtcattcgcgacgcgatggcggcgaccaacatggtcggg
atctcgcggctcgtgatgtaccgccgagagcgcgccgtgatgctggtgccgcgcgacaat
ggcatcgtgctgtggacgctgcgttatggcgaggaagtgcgcgatccgaatgcgtatttc
ggcgacatgaagtcgagcaaacctgactcgaagctgatgccgctcgtgaagcagctgatc
gacgagcgcaccaaagagtggacgccaaaaatggtcgacgatcccgtgcaggatcgtctg
ctcgacatcatcgcggacaagcagaagggcaagaagcgtagcgcgaagacgaaggccgcg
ccggcgcccgaaacatccggcaatgtcatcaacatcatggatgcgctgaagaagtcgatc
gcggccggagccaagaagaaataa
DBGET
integrated database retrieval system
