Variibacter gotjawalensis: GJW-30_1_03339
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Entry
GJW-30_1_03339 CDS
T05320
Symbol
rsmB_2
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vgo03009
]
GJW-30_1_03339 (rsmB_2)
Enzymes [BR:
vgo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
GJW-30_1_03339 (rsmB_2)
Ribosome biogenesis [BR:
vgo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GJW-30_1_03339 (rsmB_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
Ubie_methyltran
Methyltransf_25
FtsJ
MTS
Methyltransf_24
Methyltransf_15
Retro_M
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
BAT60789
UniProt:
A0A0S3PXX4
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Position
complement(3418874..3420175)
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AA seq
433 aa
AA seq
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MTPAARLSATIEVLDDIIARRRPAADALKDWGLAHRFAGSGDRAAIGSLTFDALRKRASS
AWIMGDESPRAIALGMLKRERNFNLAAIEKLTDGGRFAPSPLSEDERARLDTADVSSAPA
WVAGDYPEWLDPYLTASFGDDRAEEGAALAARAPVDLRANLIKSDAQKVAAELAEYHAQP
TRWSPTGVRIALGSDAKAPPLQSEPGYLKGMFEVQDEGSQLAALFAAPEGGKRVIDLCAG
AGGKSLALAALMHNRGEVIATDSDKRRLAPIYARLERASAKCVKVLTPRGKTDVLAEFDL
SADLVLVDAPCTGSGAWRRNPDAKWRIRPGALEIREREQAEVLDRAARLVRPGGRLAYVT
CSVLDNENGAQVRSFLSRSKSFSVILPDEVISALGERAMVFGKAARLSAEGILMTPRTTE
TDGFFVSVLRREG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgcagcacgactttcggcgaccatcgaagttcttgacgacatcatcgctcgg
cggcggcccgccgccgatgcgttgaaagactggggtctcgcgcatcgcttcgcagggtct
ggcgatcgcgcggcgatcggttcgctgactttcgatgcgctgcgcaaacgtgcgtcttcg
gcatggatcatgggcgacgagagcccgcgcgccatcgcgctcgggatgctcaagcgtgag
cgcaatttcaatctcgcggcgatcgagaagctgacggacggtgggcgcttcgcaccgtcg
ccgttgagcgaagacgagcgtgcgcggctcgatacggccgatgtatcgtcggctcccgcg
tgggtcgcgggggattatccggaatggctcgacccttatctcacggcaagcttcggcgat
gaccgtgccgaagagggtgcggcgctggcggcgcgcgcgccggtcgatctccgcgccaac
ctgatcaagagcgatgcgcagaaggttgcggcggagcttgccgagtatcacgcgcagccg
acccgctggtcgccgacgggcgtgcgcatcgcgctcggctcggacgcgaaggcgccgccg
ctgcaatcggagcccggctatctcaagggcatgttcgaggtgcaggacgaaggctcgcag
cttgcggccttgttcgccgcgcccgagggcggcaagcgtgttatcgatctttgcgccggg
gccggcggcaagagcctcgcgctcgcggcactcatgcacaaccgcggcgaggtcatcgcg
accgacagcgacaagcggcgcttagcgccgatctatgcgcgtctcgagcgcgccagcgcg
aaatgcgtcaaagtgctgacgccgcgcggcaagaccgacgtccttgccgagttcgatctc
agcgccgacctcgtgttggtcgatgcgccgtgcacgggcagcggcgcgtggcggcgcaac
ccggacgccaaatggcgtatccggcccggcgccttggaaatccgagagcgcgagcaggcc
gaggtgctggaccgcgccgcgcgcctggtgcggccgggcgggcggctcgcctacgtcacg
tgctcggtgctggacaacgagaacggcgcgcaggtgcgcagtttcctcagccgatcgaag
agtttttcggtgattttgccggacgaggtcatctcggcgctcggcgagcgcgcgatggtg
ttcggcaaggcggcgcggctttcggccgagggcatcctgatgaccccgcggaccaccgag
accgatgggttttttgttagcgttttgaggcgggaaggctag
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