Vibrio harveyi: AL538_05900
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Entry
AL538_05900 CDS
T04380
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00550
Peptidoglycan biosynthesis
vhr01100
Metabolic pathways
vhr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AL538_05900 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AL538_05900 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vhr01011
]
AL538_05900 (mrdA)
Enzymes [BR:
vhr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AL538_05900 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vhr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AL538_05900 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AMF97314
UniProt:
A0A454B597
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All DBs
Position
1:1244160..1246064
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AA seq
634 aa
AA seq
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MLRKRNEFRDHNQEVRLFKNRAIVAFIGMVILLGGLVANLYNLQVNHFKDYQTRSNDNRI
KILPIAPTRGLIYDRNGVLLAENRPVYNLDMIPEQAGDPDALIEKLRHYIDITPDQVESF
KKRYKHTRRFRSVTIMNELNDKQVARFSVHQHEFNGVFVTADLKRYYPYGEELTHVLGYV
SHINDRDLRRLDEEGKAQNYQATQNIGKLGVERYYEDILHGTKGYEEVEVNSRGRVIRTI
KYVPPVPGKDIVLNLDIELQEYVYKQLNHRQGSAVVLDPRDNSVLAMASSPSYDPNPFVN
GISSKAYRALLNDPAHPLVNRTTLGVYPPASTVKPFMAVAGLEEHVITPSTVRNDHGIWR
IPGSKPNSKAWRDWKRWGHGNVDVTKAIEESVDSFFYQTAFDLGIDRISKWMNKFGFGLP
TGIDIYEESSANMPTREWKIARHRTPWYQGDTVPIGIGQGYWTATPMQIAKATSFLINHG
EMKAPHLLKAVIEHGEDFKNQVDVKPKALPSIEGVPEKFWDIPINAMRLVNNGAHGSGRR
AFRGAEYSSGGKSGTAQVFGLRKDEVYNSKKLANHLLDHALFTAFAPYDKPKYVATVVIE
HGNGGSKVGAPFIRNVFDHLLVHHDKDDSNKVKS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgctacgcaagcgaaacgaattccgagaccacaatcaggaagtaagattgtttaaaaac
cgcgccatcgttgcttttatcggcatggttattttgttgggaggactggttgctaacctt
tataacttgcaggttaatcacttcaaagattaccaaactcgctcgaacgacaaccgaatc
aaaatcctgccaatagcccctacccgtggtcttatatatgaccgaaatggcgttttgttg
gctgagaaccgtcctgtttataacttagatatgatcccagaacaggcgggcgatccagat
gcattaattgaaaaactgcgtcactatattgatatcaccccagatcaagtcgaatccttt
aaaaagcgttacaagcacactcgccgctttcgttctgtcacgatcatgaacgaactgaat
gacaagcaagtggcgcgcttttctgttcatcagcacgagtttaacggcgtctttgttacc
gcagatctcaaacgttactacccttacggcgaagaactgacccatgttttgggttacgtt
tctcacatcaatgatcgagacttgcgtcgactggatgaagaaggcaaagcacagaattat
caggcaacgcaaaacatcggcaagttaggtgttgaacgttattacgaagacatcctccac
ggcaccaaaggctacgaggaagtagaggtaaacagtcgcggtcgcgtgattcgtacgatc
aaatatgtgccgccagttcccggaaaagacatcgtattgaatctggatattgagctacaa
gagtatgtctacaaacaactcaaccatcgccaaggcagcgcagtcgtgctcgatccacgc
gacaatagcgtattagccatggcatcaagtccgagttatgacccaaacccttttgttaac
ggcatctctagcaaagcctaccgtgccttactcaatgatccagctcacccacttgtgaac
cgtacaacgcttggcgtttaccctcctgcttctacggtaaaaccttttatggccgtcgct
gggcttgaagaacacgtcatcacaccaagtaccgtgcgcaacgatcacggtatctggcgt
attcctggctctaaaccaaattcaaaagcatggcgagattggaaacgttggggtcacggc
aacgtggatgtcaccaaggcaattgaagaatcggttgattccttcttttatcagaccgca
tttgaccttgggattgaccgcatttcgaaatggatgaataaatttggctttggcttgcca
acgggcatcgatatttacgaagaaagtagcgcaaacatgccgacacgagaatggaaaatc
gcacgtcatcgcaccccttggtatcaaggtgatacggtgcctatcggtattgggcaaggt
tattggacagcaacaccaatgcagatagccaaagcaacatcattcctcattaatcatggc
gaaatgaaagcgccacaccttctcaaagccgtgattgaacatggggaagacttcaaaaac
caagtcgatgttaaaccaaaagcgctgccttctatcgaaggagtaccagagaagttctgg
gatattccaatcaacgccatgcgcttggtaaataatggggctcatggttctggtcgccgt
gcatttagaggcgcagagtacagcagtggcggtaagtcagggactgcgcaggtatttggt
ctgcgcaaagacgaagtctacaactccaaaaaactcgcaaaccacctactcgaccacgca
ttgtttaccgcgtttgcaccatacgataaacccaaatacgtggcgaccgtggttatcgag
cacggaaatggtggctctaaagtgggcgcgccgttcattcgaaatgtgtttgatcacttg
cttgtccatcacgataaagacgacagcaataaggtgaagtcttaa
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