Vibrio natriegens: PN96_13240
Help
Entry
PN96_13240 CDS
T04636
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vna
Vibrio natriegens
Pathway
vna00071
Fatty acid degradation
vna00280
Valine, leucine and isoleucine degradation
vna00310
Lysine degradation
vna00362
Benzoate degradation
vna00380
Tryptophan metabolism
vna00410
beta-Alanine metabolism
vna00640
Propanoate metabolism
vna00650
Butanoate metabolism
vna00907
Pinene, camphor and geraniol degradation
vna00930
Caprolactam degradation
vna01100
Metabolic pathways
vna01110
Biosynthesis of secondary metabolites
vna01120
Microbial metabolism in diverse environments
vna01200
Carbon metabolism
vna01212
Fatty acid metabolism
Module
vna_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PN96_13240 (fadB)
00650 Butanoate metabolism
PN96_13240 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PN96_13240 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PN96_13240 (fadB)
00310 Lysine degradation
PN96_13240 (fadB)
00380 Tryptophan metabolism
PN96_13240 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PN96_13240 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PN96_13240 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PN96_13240 (fadB)
00930 Caprolactam degradation
PN96_13240 (fadB)
Enzymes [BR:
vna01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PN96_13240 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PN96_13240 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PN96_13240 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PN96_13240 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Carboxyl_trans
DUF5546
DAO
Motif
Other DBs
NCBI-ProteinID:
ALR16872
LinkDB
All DBs
Position
1:2891325..2893496
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEIQDGIAELSFCSPKSVNKLDLATLESLDKALDALIAHQGLKGVMLTSD
KDAFIVGADITEFLGLFAKTDEELDQWLQFANSIFNKLEDLPVPTISVIKGHALGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADNAMEIITQGKALRADEALK
LGLLDAVVDSDSLHASALQTLTSAINEKLDWQARRKQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPITSVLTIEEGARFARNEALDVERKHFVKLAKSEEAKSLVGLFLSDQYIK
GIAKKAAKSANKDTKRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQASLDLGMNEASKL
LNKRLATGRLDGFKMAGILASITPSLHYAGIENSDVIVEAVVENPKVKAAVLSEVEQNVG
EDTVITSNTSTIPINVLAQSLQRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTQIDKIMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPERMGKQGRDAIDTLFEANKFGQKNGSGFYSYSVDKKGK
PKKTFSEEILPLLADVCADKRDFDEQTIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEYIETAKQHAELGAMYQVPQMLIDMAAKGETFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaaatacaggatggcattgcagagctg
agtttctgctcgccaaaatccgtaaataaactcgatttagcgacacttgagtcactagac
aaagcccttgatgcacttatcgcacaccaaggtctgaaaggcgtaatgctgacttcagat
aaagatgcgttcattgtaggtgcagacattactgaattcttaggcctgtttgctaagact
gatgaagaactggatcagtggctacaattcgccaacagcatcttcaacaaacttgaagac
cttccagtcccaaccatctcagtcatcaagggccacgctcttggtggtggctgcgagtgt
gtattggcaacagacatgcgcatcggtgataaaaccaccagcatcggtctaccagaaacg
aaacttggcatcatgccaggctttggtggttgtgtacgtctacctcgtgttatcggtgct
gataacgcgatggaaatcattacacaaggtaaagcgctccgtgctgatgaagcactaaaa
cttggcctgttggatgcggttgtcgattcagactctctgcatgcatccgctctgcaaaca
ctgacgtctgcaatcaacgaaaaacttgattggcaagctcgccgcaaacaaaagacatca
ccactaacgctaagcaagctagagtcgatgatgagcttcaccatggcaaaaggcctggtg
gcgcaaaaagcgggtccacactacccggcaccaatcacatcagtccttactattgaagaa
ggcgctcgatttgcacgtaatgaagcgctggatgttgaacgtaagcacttcgttaaacta
gcaaaatcagaagaagcgaaatcattggttggtctgttccttagcgatcagtacattaaa
ggcatcgctaaaaaagcggcaaaatcagcaaacaaagacactaaacgtgctgctgtactt
ggcgcaggtatcatgggtggcggtatcgcttaccagtcagcactgaaaggtgtgcctgta
ctgatgaaagacatcgctcaggcctcattagatttgggcatgaatgaagcatcgaaactg
ctgaataagcgtcttgctacaggtcgtcttgacggcttcaagatggcgggcatcctcgcg
tctattactccaagcttgcactacgctggcatcgaaaactcagatgtgattgtcgaagcc
gtggttgagaatccgaaagtaaaagcggcggtactgagcgaagtcgagcaaaacgtgggc
gaagatacggttatcacgtcgaacacatcgaccattccaatcaacgtactggctcagtca
ctacaacgcccagaaaacttctgtggtatgcacttctttaaccctgtgcatcgcatgcca
ttggttgaaatcatccgcggcgaaaaaacgtcagatgaaaccatcaaccgtgttgtggct
tacgcagcgaaaatgggtaaatcaccaatcgtcgttaatgactgccctggattcttcgta
aaccgcgtactgttcccgtactttggtggtttcagcatgctacttcgtgacggagctgac
ttcacacaaatcgataaaatcatggaacgcaagtttggttggccaatgggtccagcctac
ttgcttgacgttgtaggtatcgatacagctcaccacgcacaagccgtcatggctgaaggc
ttcccagagcgtatgggcaagcaaggtcgcgatgcgattgatactttgtttgaagccaac
aagtttggccagaaaaatggcagcggtttctacagctattcagttgataagaaaggtaaa
ccgaagaagaccttctctgaagaaatcttgccactgttagctgacgtatgtgcagataaa
cgtgacttcgacgagcaaaccatcatccaacgaatgatgattcctatgatcaacgaagtg
gtgctgtgtctacaggaaggcattatcgcgacaccacaagaagcggacatggctctggtt
tacggtctgggcttccctccattccgcggcggtgtattccgctacctagacagcgttggt
attgctgaatacatcgaaacagcaaaacaacacgctgaactaggcgcgatgtaccaagta
ccgcaaatgctgattgatatggcagccaaaggcgagaccttctacggcgcacaacagcaa
ggctctatctaa
DBGET
integrated database retrieval system
