Vibrio nigripulchritudo: VIBNI_A3036
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Entry
VIBNI_A3036 CDS
T02871
Symbol
metH
Name
(GenBank) Methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00270
Cysteine and methionine metabolism
vni00450
Selenocompound metabolism
vni00670
One carbon pool by folate
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01230
Biosynthesis of amino acids
Module
vni_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VIBNI_A3036 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VIBNI_A3036 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VIBNI_A3036 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
VIBNI_A3036 (metH)
Enzymes [BR:
vni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
VIBNI_A3036 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
CCO59063
UniProt:
U4KGX3
LinkDB
All DBs
Position
1:complement(3231802..3235482)
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AA seq
1226 aa
AA seq
DB search
MAGSNLRQQIEQQLSERILFIDGGMGTMIQDLKLEEEDYRGKRFSDWHCDLKGNNDLLVL
TQPELIKNIHSQYLEAGADILETNTFNATTIAMADYDMESLSEEINFEAARLAKAAADEW
TAKTPDQPRYVAGVLGPTNRTCSISPDVNDPGYRNVSFDELVVAYSESTRALIRGGSDLI
LIETIFDTLNAKACAFAVESVFEELGVELPVMISGTITDASGRTLSGQTTEAFYNALRHV
KPISFGLNCALGPDELRQYVEELSRISECSVSAHPNAGLPNAFGEYDLSPEDMAEHIGEW
ARSGFLNLVGGCCGTTPEHIRQMTLVCKGVKPRPLPDIPVACRLSGLEPLTIEKETLFVN
VGERTNVTGSARFKRLIKEELYDEALDVARQQVENGAQIIDINMDEGMLDAEACMIRFLN
LCASEPEISKVPIMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFVEQAKLIRRYGA
AVVVMAFDEVGQAETRERKLEICTNAYKILVDEVGFPPEDIIFDPNIFAVATGIEEHNNY
AVDFIEAVGDIKRDLPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKNGMDMGIVN
AGQLEIYDNVPDKLREAVEDVVLNRRDDGTERLLDIAAEYAGKGVGKEDDASALEWRTYP
VEKRLEHALVKGITEFIVDDTEEARQKASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQV
VKSARVMKQAVAHLEPYINAEKQAGSSNGKILLATVKGDVHDIGKNIVGVVLQCNNYEIV
DLGVMVPCEQILKVAKEENVDIIGLSGLITPSLDEMVHVAKEMERQGFDLPLLIGGATTS
KAHTAVKIEQNYHQPVVYVNNASRAVGVCTSLLSDELRPAFVEKVDADYVRVRDQHNRKK
PRTKPVNLEKARSNCVDIDWENYTPPVPTKPGVHVYDDFDVATLRKYIDWTPFFMTWSLV
GKYPKILEHEEVGEEAKRLFKDANDLLDRVEKEGLLKARGMCALFPAASVGDDIEVYSDE
SRTEVAHVLHNLRQQTEKPKGFNYCLSDYIAPKSSGKKDWIGAFAVTGGIGERELADAYK
AQGDDYNAIMIQAVADRLAEAFAEYLHEQVRKDIWGYAADENLDNEDLIREKYQGIRPAP
GYPACPEHTEKGTLWEMLKVEEAIDMSLTTSYAMWPGASVSGWYFSHPDSRYFAIAQIQE
DQAKDYAERKGWEWEEAEKWLGPNLN
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
gtggctggaagcaatttaagacaacaaatagaacaacaattatccgaaagaatcctgttt
attgatggtggtatgggtaccatgattcaggatcttaagttggaagaagaggactaccgt
ggtaaacgtttctctgattggcattgtgacctaaaaggaaacaacgacctgttggtctta
acgcaaccagagctaatcaagaacattcacagccagtatcttgaagccggtgcggacatt
cttgaaaccaacacctttaacgctacgaccattgcgatggctgactatgatatggaaagc
cttagcgaagagatcaattttgaagcggctcgcttagccaaagcagcggcagatgagtgg
acggcaaaaacaccggaccagcctcgatatgttgcaggtgtactgggaccaacgaaccgt
acttgttctatttcccctgatgtgaacgacccaggttatcgaaacgtgagtttcgatgaa
ttggtggttgcttattccgagtccacacgagcccttatcagaggcggctctgatcttatc
cttatcgaaaccatattcgataccttgaacgcaaaagcgtgtgccttcgcagttgaatct
gtatttgaagagctcggcgttgaactaccggtaatgatttcaggtaccatcaccgatgct
tccgggcgtacgctctccggccaaacgactgaagcgttctacaatgcgctaagacatgta
aaaccaatttctttcggtctgaactgtgcattgggtcccgatgagcttcgtcaatacgtg
gaagagctttcccgtatttctgagtgcagcgtgtctgcgcaccccaatgccgggcttcca
aatgcttttggtgaatacgatctttcgccagaagatatggcggagcacattggcgaatgg
gcacgttctggttttctaaacctagttggtggttgttgtggtaccactcccgaacacatt
cgtcagatgacgctagtctgtaaaggtgtaaaaccccgtccattgcctgacattccagtg
gcatgccgcctttctggtcttgaacctttaaccatcgaaaaagagacattgtttgttaac
gttggtgagcgtactaacgtgacgggttcggctcgctttaagcgtctgattaaagaagag
ttgtacgacgaagctctcgacgttgcccgtcaacaggtagaaaacggcgcgcagatcatc
gacatcaacatggatgaagggatgctggatgcagaagcctgtatgatccgtttccttaat
ttgtgtgcgtctgaacctgagatttccaaagtaccaatcatggttgactcctctaagtgg
gaagtcatcgaagccggtcttaaatgcattcagggtaaaggcattgttaactctatctct
ttgaaagaggggaaagagaagtttgttgagcaagcgaagctgatccgtcgatacggcgct
gccgttgttgtgatggcgtttgacgaagtcggacaggctgagactcgcgaacgtaaactc
gagatttgtaccaatgcttataagattctggtcgatgaagttggcttcccgccagaagac
atcatttttgacccgaatatcttcgctgtagctactggtattgaagagcacaacaactac
gcagtcgactttatcgaagcggttggcgatatcaaacgagacttgccacacgccatgatc
tctggtggtgtatccaacgtttctttctctttccgaggtaataactacgtacgtgaggcg
attcacgcagtgttcttgtaccactgtttcaagaatggtatggacatggggatcgtaaat
gctggtcagctagaaatttacgacaacgtacctgataagcttcgtgaagcagtagaagac
gttgtactgaaccgtcgtgacgatggcacagaacgcttgctggatatcgcagcggaatac
gcaggaaaaggcgtcggaaaagaagacgatgcttctgcattggaatggcgcacttaccca
gtagaaaaacgtctggagcatgcactggttaaaggcatcactgaatttattgttgatgat
acggaagaagcgcgccagaaagcctccaaaccactggaagtgattgaaggtcctttgatg
gatggcatgaacgtggttggcgacctgtttggtgaaggcaagatgttccttcctcaggtg
gtgaaatcagctcgtgtaatgaaacaggcagttgcccatttagaaccgtacatcaatgca
gaaaagcaagcgggttcgtccaacggtaagatcctgctggcaaccgtaaaaggagatgtt
cacgatatcggtaaaaacatcgtgggcgtagttttgcagtgtaacaactacgaaattgtc
gacctaggcgtgatggttccttgtgagcagatcctgaaagtcgctaaggaagagaacgtc
gacatcattggtctttctggtcttatcacaccttcactggatgaaatggttcatgtggcg
aaagagatggaacgtcaagggtttgatcttccactccttattggcggtgcaacaacctca
aaagcgcataccgcggtgaagatagaacagaattaccaccaacctgtggtctatgtgaat
aatgcttcacgagcggtaggtgtgtgtacatctttgctatccgatgagttgagaccagcc
tttgttgaaaaggtggatgccgactacgttcgagtgcgtgaccagcataaccgtaaaaaa
cctcgcactaagccagtgaatcttgagaaggcacgttctaactgtgttgatattgactgg
gaaaactatacgcctcccgtccctaccaaacctggtgtgcatgtgtacgatgatttcgat
gtggcaacactgcgcaagtacatcgactggactccattctttatgacttggtcacttgtg
ggtaaatatccaaagatcctcgaacatgaagaagtaggtgaagaagcaaaacgcctgttc
aaagacgcgaacgatttgcttgatcgtgtggaaaaagagggcttactgaaagcacgtggt
atgtgtgcgctattcccggcagcgagtgtcggcgacgacatcgaagtatacagtgatgag
agccgcactgaagtagcacatgttttacataacttacgtcagcaaactgaaaaaccaaaa
ggttttaactactgcctttcagactatattgcaccgaaatcttcaggtaaaaaagactgg
attggtgcctttgcggtcactggtggtattggcgagcgtgaacttgccgatgcctataaa
gcgcagggtgatgactataatgccatcatgattcaagcggtggcagaccgtttagcagaa
gcttttgcagaatacttgcatgagcaggttcgtaaagacatttggggttatgcggcagac
gaaaatctggataacgaagatctgattcgcgagaaatatcagggtattcgaccagcaccg
ggttatcctgcctgtcctgaacataccgagaaaggcactttgtgggagatgctcaaagtc
gaagaagccatcgatatgtcgctgacaaccagctacgccatgtggccgggtgcttctgtg
tctggctggtatttctctcaccctgattcacgttactttgctattgcacagattcaggaa
gatcaggcgaaagactacgcagagagaaaaggctgggagtgggaagaagctgagaaatgg
ttgggtccaaatcttaactga
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