Vibrio parahaemolyticus RIMD 2210633: VP1916 Help Entry VP1916            CDS       T00120                                  Name (GenBank) putative amidase   KO K21470   L,D-transpeptidase YcbB Organism vpa  Vibrio parahaemolyticus RIMD 2210633 Brite KEGG Orthology (KO) [BR:vpa00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:vpa01002]     VP1916    01011 Peptidoglycan biosynthesis and degradation proteins [BR:vpa01011]     VP1916 Peptidases and inhibitors [BR:vpa01002]  Cysteine peptidases   Family C82    VP1916 Peptidoglycan biosynthesis and degradation proteins [BR:vpa01011]  Peptidoglycan biosynthesis and degradation   Transpeptidase    VP1916 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  YkuD Scaffold PG_binding_1 HPPK PG_binding_3 Motif Other DBs NCBI-ProteinID:  BAC60179 UniProt:  Q87NF2 LinkDB All DBs Position 1:complement(2000602..2002191) Genome browser AA seq 529 aa AA seqDB search MASSARIVSVFARVLIMTALMVPFCSFSTVVSLDASAQTEQEGAVEQLSVEKMIHYPTVI DQLYQSTNYRLNWENESDVEQFIFQMKLVALADVSKEFDNQLHRINQVRWKGDNLDFDLV MTDSLLMYLSYLEQVPQEGVNWLFANKAHVSFPAPSVDTLSVLSNEITVGKLDQFLASLR SPLQMDASFNTVFASLSEFSQYQYPFYEQKGLSRVGDPIENKSTLVERMAIVGVDVSYID SEIPQYDENLELAVKEFQRIHGLNQDGVIGPNTIRWINFSPQQRLHLLALNAERSRIWAK ERDNVVFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMTGTLDSVILNPTWNVPWKI MVKDIIPKVKRNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFPYRMRQASGSHN ALGLYKFNMPNPQAIYLHDTPSKNLFQQDRRAFSSGCVRVENADQLAELLFKTQGLEERL EKKRESARSSTTSVPLGERIPVHIIYQTAWLEEGTLYYRDDIYKYDHQG NT seq 1590 nt NT seq  +upstreamnt  +downstreamnt atggcaagtagcgcaaggatcgtttcagtgtttgctagggttttaataatgacggcactt atggtgccgttttgcagcttttctaccgtggtttctctcgatgcttctgcccaaacggag caagaaggggccgtagagcagttgtctgtcgaaaaaatgatccattatccaacggtgatt gatcaactttatcaaagtacgaattaccgtttgaattgggaaaatgagagcgatgttgaa cagttcatttttcagatgaagctggtcgcgcttgctgacgtttctaaagagtttgacaac caactgcatcgtattaaccaagtaagatggaaaggagacaaccttgacttcgatttggtg atgaccgattccctccttatgtacctcagctatcttgagcaggttcctcaagaaggcgtt aactggttgtttgcaaataaagcccatgtgagctttcctgcgcctagtgtggatacgcta tcggtactgagcaatgagatcacggtagggaagctggaccagtttttagccagcttgcgc tcgcctttgcaaatggatgcctcgtttaatacggtatttgcttcgctttctgaattctcg caatatcaatatcctttctatgagcaaaaaggtctgtcgcgcgtcggtgatccgatagaa aacaaatcaacccttgttgaacgcatggcgatcgtcggagtggatgtcagttacatcgat tcagaaataccgcaatacgatgaaaatttggagctggcggtgaaagaattccagcgtatt catggcttgaaccaagatggcgtaattggtccgaacaccattcgttggatcaacttctct cctcaacaacgtttgcacttgctggcattgaatgcggagcgttctcgtatttgggcgaaa gaacgagacaatgtcgtgtttgtgaacgtgccgggttatgaagttacgtactggcatgat ggtcagccactgtttgaatcaaaagttgtggttggtcgagcttcaagaaaaaccccaatc atgactggaacgctagattcggtgatcttaaatccaacttggaatgtgccttggaaaatc atggtgaaagacatcattccaaaagtgaaacgcaatccgatgtatttaatggaacataac attcaaatcatccgttcttggacgtcgcgcgaaatcatcgatccaaccacgatcaactgg gcaacagttaatccaagaaccttcccgtaccgcatgcgtcaggcttctggttcgcacaat gcgttgggtttgtacaagttcaacatgccgaacccacaagccatatatctacacgacact ccaagtaaaaacttgttccaacaagatagaagggcgtttagctcgggttgtgttcgagta gaaaacgccgatcaacttgcagagcttctgttcaaaactcaaggtttggaagagcgttta gagaaaaagcgggaaagcgctcgttcatcaacgacttcggtgccactaggggagcgtatt ccggtacacatcatctaccaaacagcttggttggaagaaggtacgctgtattaccgagat gacatctacaaatacgaccatcaaggctaa

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