Vibrio parahaemolyticus RIMD 2210633: VP2884
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Entry
VP2884 CDS
T00120
Name
(GenBank) NifR3/Smm1 family protein
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpa03016
]
VP2884
Transfer RNA biogenesis [BR:
vpa03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
VP2884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
NanE
SOR_SNZ
DHO_dh
Oxidored_FMN
ThiG
NMO
PEP_mutase
NTP_transf_9
Motif
Other DBs
NCBI-ProteinID:
BAC61147
UniProt:
Q87KU1
LinkDB
All DBs
Position
1:3055385..3056380
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AA seq
331 aa
AA seq
DB search
MLAQNCDDVLKIGNYQLKNNLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSANPKLWKT
SKSKQRMVHEGESGIRSVQIAGSDPQLMADAAQFSVENGAQIIDINMGCPAKKVNKKLAG
SALLQYPTIIEEILKAVVNAVDVPVTLKTRTGWDTDNKNCVQIAKLAEDCGIQALALHGR
TKACMYKGEAEYDSIKAVKEAISIPVIANGDIDSPEKAKFVLEYTGADALMIGRPAQGRP
WIFQEIHHYLENGTTMDELPTQEVKAIMLGHVNALHEFYGEYLGPRIARKHVGWYLKEHE
QASEFRRTFNAIDAAPLQIEALEGYFDNVAS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ttgctggcacagaactgtgatgacgttttgaaaatcggaaactaccaacttaagaacaat
ctaatcgtagcccctatggctggtgtaacggatagaccgttccgcgagttgtgtcttcgt
tatggtgcgggcatggccgtcagtgaaatgatgtccgccaacccaaaactatggaaaacg
tcgaagtcgaaacagcgcatggtacatgaaggcgaatcgggcattcgctctgtacaaatt
gccggttccgatccacagcttatggcagatgcagctcaattcagtgttgaaaacggtgcg
caaatcatcgacatcaacatgggctgcccggcaaaaaaagtgaataagaagctggcgggc
tctgcactgcttcaatacccaaccattatcgaagagattttgaaagcggtagtgaatgcg
gtagacgttcctgtaacgttaaagacccgaacaggctgggatacagacaacaaaaactgt
gtccaaatcgctaaattagccgaagactgcggcatacaagctcttgccctgcatggcaga
acaaaagcgtgtatgtacaaaggtgaggccgaatacgacagcattaaagcggtaaaagag
gcgatttcaattccggttatcgcgaacggtgatatcgatagcccggagaaagccaaattt
gtactggagtacaccggtgcggacgctttaatgattggacgccctgcccagggtcgtcct
tggattttccaggaaatccatcactatttggaaaacggcaccactatggatgagcttccc
actcaggaagtgaaagccattatgcttggtcatgtgaatgctcttcatgaattttatggt
gagtatttaggtccacgtatcgcgcgtaagcacgtaggttggtatctgaaagaacatgaa
caagcgagtgagtttcgccgtaccttcaacgctatcgacgcagctccgctgcaaattgaa
gcgctagaaggttattttgataacgttgcatcataa
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