Vibrio parahaemolyticus RIMD 2210633: VPA1645
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Entry
VPA1645 CDS
T00120
Name
(GenBank) glycogen operon protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00500
Starch and sucrose metabolism
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VPA1645
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
VPA1645
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
APT
Motif
Other DBs
NCBI-ProteinID:
BAC62988
UniProt:
Q87FN4
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All DBs
Position
2:1754755..1756746
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AA seq
663 aa
AA seq
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MTRLFSRPYPLGATLNKEGCNFSIHAPGVKDIQLALFASDGSYSLHDLPNEYAGIRHTFI
PDIKPGQKYGYVVTRRDEPLLISDPYAKSLDKALHYHPPYTPAKSFDMPKCVVIEDTFDW
QETDHPRIPREDMVLFETHVKGLTQLHPEVSATTKGRYLGLASPQMLAFYKQQNINTLQL
LPIAACMHEPHLLEMGKVNYWGYNPYLFMVPDPRYAEKDAVTELKTTIRELHKHGIEVIL
DVVYNHTAEGGEGATVFNLKALDSRFYIKHGNHFANYTGCGNTVDLTYQPALNLVMDTLR
YWVSEFKIDGFRFDLAATLGRQGDDYNPEAAFFKAVAQDPILRETKLIAEPWDIGPNGYQ
VGNFPFGWNECNDKLRDISRSFWRGDQGYLKEFATRLMGSRDIYSAANWPYKLTVNYITY
HDGFTLQDLVSYKHKHNEANGEENRDGHGDNRSENYGVEGETENIMIIATREKQKRNLIA
SLLFAFGIPHILTADVLSHSQDGNNNAYCQDNKTSWINWSETERKAHFKTWMAQMVANRH
QYMVPFIRAFSGENRNNNRIFWRRTDGRLMEHDDWNRLSSVALHLGIGKDGQELVYLINQ
TNATARFKLPNERNQEWVTICDTNVRNLNPGHAEGEVLLSPTSMVILHYQPKPNSPQGEQ
LQS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacacgacttttctctcgcccctaccccctaggcgcaacgttaaataaagaaggctgt
aacttctctattcatgctccgggtgtaaaagatatccagctggcattgtttgcaagcgat
ggcagctatagtttgcatgacttacccaatgaatatgcgggtatacgtcatacctttatt
cccgatatcaaaccggggcaaaaatatggttacgttgtcacacgtagagatgaaccatta
ctcatctctgatccttacgccaaatctttagacaaagcccttcactaccatcctccttat
actccagccaaaagttttgatatgccgaaatgcgtcgttattgaagacactttcgactgg
caggagacggaccatcctcgtatcccgagagaggacatggtgctgtttgagacgcacgtc
aaagggcttacccaattacatccagaagtcagtgcaaccaccaaagggcggtatcttggc
cttgcttcacctcaaatgctggcgttttacaaacagcaaaacatcaacacgttgcaattg
ctacctatcgcagcgtgcatgcatgagccacatttattggagatgggtaaagtcaactat
tggggttacaacccttatttgtttatggtgcccgatcctcgttacgcagaaaaagacgcg
gtaaccgagctcaaaaccaccattcgtgagctgcacaagcatgggatcgaagtgattctg
gatgtggtttacaaccacacagcagaaggaggcgaaggcgcgacggtgtttaatctcaaa
gcgctcgattctcgcttttacattaagcacggcaatcactttgccaactatactggttgt
ggcaacacggtcgatctcacctatcaaccagcattaaatctggttatggacacgctgcgt
tactgggttagcgaattcaaaatcgacggtttccgctttgatttggccgccactttggga
cgccaaggggatgattacaacccggaagcggcatttttcaaagccgtcgctcaagacccg
attttgcgtgaaaccaaattgattgccgagccgtgggatattggccctaatggctatcaa
gttggtaacttcccatttggttggaacgaatgtaacgacaagctgcgcgatatttcccgc
agtttttggcgtggtgatcaaggctatttgaaagaattcgccactcgccttatgggctct
cgcgatatctacagcgccgccaactggccatacaaactcacggtaaattacatcacttac
cacgatggcttcacgttgcaagatttagtctcttacaagcacaaacataacgaagccaat
ggcgaagagaaccgcgatggccacggtgacaaccgctcagaaaactacggcgtagaaggc
gagacggaaaacatcatgatcatcgccacgcgtgagaagcaaaaacgcaacctgattgcg
agcttgctctttgcgtttggtattccgcacattttgaccgccgatgtattgtcacactcg
caagatggcaacaataacgcctactgccaagacaataaaaccagttggatcaactggagc
gagacggagcgcaaagcgcacttcaaaacttggatggcgcaaatggtcgcaaaccgtcac
caatacatggtgcctttcatccgtgctttcagcggcgaaaatcgcaacaacaaccgtatt
ttctggcgtcgaaccgatggccgattaatggaacacgacgactggaaccgattaagctcc
gtagcgcttcacttaggcattggtaaagacgggcaagagttggtttacctcatcaaccaa
acgaacgctacagcgcgatttaagctgccaaacgagcgtaatcaagaatgggtaacgatt
tgtgataccaatgtgcgcaacctcaatcctgggcacgcagaaggcgaagtcttgctgtca
ccgacctcgatggtgattttgcattaccagccaaagccaaactcgccacaaggtgagcaa
ttgcaaagctag
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