Variovorax paradoxus B4: VAPA_1c10370
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Entry
VAPA_1c10370 CDS
T02835
Name
(GenBank) aminotransferase domain-containing transcriptional regulator, GntR family
Organism
vpd
Variovorax paradoxus B4
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
DegT_DnrJ_EryC1
HTH_IclR
Asp_aminotransf
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AGU48156
UniProt:
T1X6S2
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Position
1:complement(1143256..1144803)
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AA seq
515 aa
AA seq
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MDSLPLYRQLAAHYVDAIHTGSLKQGDKLPSLRSLMRLHGISLSTALQLCRTMESDGWVE
ARDRSGYFVRRPRRLAIAPMEEPPAGVPPDPAQYVGIHAKVSDFVARRRRLPEKLNFSIA
RGAPELYPAEALRNAMTRMLRQRPDMLTVAAPLKGHRQFREVLAQRSLRVGMAISPEDIL
VTNGCIEALNLALRAVAQPGDTVAVESPTFYGLLQVLESLGMRALEIPTSPQTGLSIEAL
ELAIRTYDNIKAVVVVPHLQNPLGSVMPDAHKARLAQLCERHAIPLIEDDTYSELVDAPT
PPRALKSWDAGGNVIHCASLHKILAPGLRLGWITAGRWHARVEMLKYAQTRNNEGLSQSG
AGLFMATGGYDRHLRHLRTCLKTQREQTADAIAGYFPTGTRINLPPGGLQLWVELPERLS
SSRVFDAALAERIVVAPGTLFSNSSRFDHYLRINCGWPYGEAVDTGLRRLGQIIETLMSR
SAGAATALPVRPASPPAPARPSEARRSQSSSARAA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggactcgctaccgctctaccgccagctcgcagcgcactacgtggacgcgatccacacc
ggctcgctcaagcagggcgacaagctgccttcgctgcgcagcctcatgcgcctgcacggc
atcagcctgtcgaccgcgctgcagctgtgccgcacgatggaaagcgacggctgggtcgag
gcgcgcgaccgctcgggctacttcgtgcgccggccgcggcggctggccatcgcgccgatg
gaggagcccccggccggcgtgccgcccgacccggcgcagtacgtgggcatccacgccaag
gtctcggacttcgtggcgcgccgccggcggcttcccgagaagctcaacttttccatcgcg
cgcggcgcacccgagctgtatcccgccgaggccctgcgcaatgcgatgacgcgcatgctg
cgccagcggcccgacatgctgacggtcgcggcgccgctcaagggccatcgccagttccgg
gaggtgctcgcgcagcgcagcctgcgcgtgggcatggcgatctcgccggaagatattttg
gtcaccaacggctgcatcgaggcgctcaacctcgcgctgcgtgccgtggcgcagccgggc
gacacggtggcggtggaatcgcccaccttctacggcctgctgcaggtgctcgagagcctc
ggcatgcgtgcgctggaaatcccgaccagcccgcagaccggcctctccatcgaagcgctg
gagctcgcgatccgcacctacgacaacatcaaggccgtggtggtggtgccgcacctgcag
aatccgctgggcagcgtgatgcccgatgcccacaaggcgcggctcgcgcagctgtgcgaa
cggcacgcgattccgctgatcgaggacgacacctacagcgaactcgtcgacgccccgacg
ccaccgcgcgcgctcaagtcctgggatgccggcggcaacgtgatccactgcgcctcgctg
cacaagatcctcgcgcccggcctgcgcctgggctggatcacggccggacgctggcacgcg
cgagtggagatgctcaagtacgcgcagacccgcaacaacgaaggcctgtcgcaaagcggg
gccggcctgttcatggccaccggcggctacgaccgccatctgcgccatctgcgcacctgc
ctgaagacgcagcgcgagcagactgccgatgcgatcgccggctactttccgacgggcacg
cgcatcaacctgccgcccggcgggctgcagctgtgggtcgagctgcccgagcgcctgtcg
tcgtcgcgggtcttcgatgcggcgctcgcggagcggatcgtggtggcacccggcacgctg
ttctccaactcctcgcgcttcgatcactacctgcgcatcaactgcggctggccgtacggc
gaggcggtcgacacgggcctgcgccgcctgggccagatcatcgagacgctgatgagccgc
agcgccggtgcggcaacggcgctgcccgttcggccggcatcgcccccggctcccgcccgg
ccgtccgaggcccgccggagtcagtcgagcagtgccagggcggcgtag
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