Variovorax paradoxus B4: VAPA_1c50470
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Entry
VAPA_1c50470 CDS
T02835
Name
(GenBank) ABC transporter, sugar-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c50470
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VAPA_1c50470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c50470
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VAPA_1c50470
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AGU52101
UniProt:
T1XHX5
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All DBs
Position
1:complement(5321284..5322246)
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AA seq
320 aa
AA seq
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MTSFTRRIALTAVAAAALASLPALAAEKVNLGVSIPAATHSFMGGINYWANQAKKDLEKE
HKDLKITIKTAANAPEQANQLQDLSTVTKINALVVFPFESAALTKPVAQVKAKGAYVTVV
DRGLTDTSAQDAYVAGDNTAFGRIPAEYIVKQLGGKGNVVALRGIATTLDNERMDAFNAV
LKGSPDIKLLDAKYANWNRDDAFKVTQDYLTRFKNIDAIWAADDDMAVGVLKAIEQAKRD
DIKIIFGGAGAKGMVKTIMDGKDKRIGADVSYSPKFIYDAIKLTAEARLKGEKLPATTII
PSVLITKENAKDFYHPNSPF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcttcacacgtcgcatcgcactcacggccgttgcggccgcggcgctcgcgagc
ctgcccgcactcgccgccgaaaaagtgaacctcggcgtttcgattccggcggccacgcac
agcttcatgggcggcatcaactactgggccaaccaggcgaagaaggatctggagaaggaa
cacaaggacctgaagatcacgatcaagaccgcggccaacgcgcccgagcaggcgaaccag
ctgcaagacctctcgaccgtcaccaagatcaacgcgcttgtggtgttcccgttcgaatcc
gccgcgctgaccaagccggtggcgcaggtcaaggccaagggcgcctacgtgaccgtggtc
gaccgcggcctcaccgacaccagcgcgcaggatgcgtacgtggccggcgacaacaccgcc
ttcggccgcattccggccgagtacatcgtgaagcagctcggcggcaagggcaacgtggtt
gcgctgcgcggcattgccaccacgctggacaacgagcgcatggacgccttcaacgcggtg
ctcaagggcagccccgacatcaagctgctcgacgccaagtacgccaactggaaccgcgac
gatgcgttcaaggtcacgcaggactacctcacgcgcttcaagaacatcgacgccatctgg
gcggccgacgacgacatggccgtgggcgtgctcaaggccatcgagcaggccaagcgcgac
gacatcaagatcatcttcggcggcgcgggcgccaagggcatggtcaagaccatcatggac
ggcaaggacaagcgcatcggcgccgacgtgagctactcgcccaagttcatctacgacgcg
atcaagctcacggccgaagcgcggctgaagggcgagaagctgcccgcgacgacgatcatt
ccttcggtgctgatcaccaaggaaaacgccaaggacttctaccaccccaattcgccgttc
taa
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