Variovorax paradoxus EPS: Varpa_3645
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Entry
Varpa_3645 CDS
T01392
Name
(GenBank) 2-methylisocitrate dehydratase, Fe/S-dependent
KO
K20455
2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:
4.2.1.117
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00640
Propanoate metabolism
vpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Varpa_3645
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.117 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming)
Varpa_3645
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ADU37829
UniProt:
E6UZM1
LinkDB
All DBs
Position
complement(3938931..3941555)
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AA seq
874 aa
AA seq
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MNERHRKQLPGTTLDYIDARAAVDALQSGAWDTLPYTARVHAENLVRRCDLTILDECLLQ
LIERRRDRDFPWFPVRVVCHDILGQTALVDLAGLRDAIAAEGGDPSQVNPVVPVQLIVDH
SLAVECGGFDPQAFEKNRQIEDRRNEDRFHFIDWTKRAFANMEVIPAGNGIMHQINLEKM
SPVVYVQDGLAFPDTCVGTDSHTPHVDALGVIAVGVGGLEAENVMLGRASWMRLPDIVGV
ELTGRRQPGITATDIVLALTEFLRKEKVVGAYLEFFGEGTKGLTIGDRATISNMCPEYGA
TAALFYIDDQTLTYLRLTGREDAQVALVETYAKTAGFWGDALKTASYERVLKFDLSSVVR
NMAGPSNPHRRLPTSQLAERDIAVGLAEARQQEAAGLMPDGAVVIAAITSCTNTSNPRNV
IAAGLLARNANRLGLKRKPWVKSSLAPGSKTVELYLRDAGLLTDLEQLGFGIVAFACTTC
NGMSGALDPKIQQEIIERDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAGTM
RFDIERDVLDVVDGKEIRLADLWPSDEEIDAIVAASVRPEMFRKVYEPMFAIHADNGEKV
SPQYDWRPQSTYIRRPPYWDSEGVGALAAVPRTLRGMRPLAILPDNITTDHLSPSNAILL
DSAAGEYLAKMGLPEEDFNSYATHRGDHLTAMRATFANPQLVNEMAVEGGVQKKGSLARI
EPEGKVVRMWEAIETYLDRRQPLIIVAGADYGQGSSRDWAAKGVRLAGVETVVAEGFERI
HRTNLLGMGVMPLEFKPGTTRLTLGLDGTETYDVVGEPRPHADLTLVVHRKNGEVLQVPV
TCRLDTAEEVSIYEAGGVLQRFAQDFLAENKLAA
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacgacacagaaaacaactccccggcaccacgctggactacatcgacgcccgc
gccgcggtcgatgcgctgcaaagcggcgcctgggacacgctgccctacaccgcgcgcgtg
cacgccgagaacctggtgcgccgctgcgacctgacgatcctcgacgaatgcctgctgcag
ctcatcgagcgacggcgcgatcgcgactttccgtggtttccggtgcgcgtggtgtgccac
gacatcctgggccagaccgcgctggtggatctcgcaggcctgcgcgacgccatcgcggcc
gagggcggcgatccgtcgcaggtaaatcctgtcgtgccggtgcagctgatcgtggaccat
tcgctggccgtggagtgcggcggattcgatccgcaagccttcgagaagaaccgccagatc
gaagaccgccgcaacgaagaccgcttccatttcatcgactggaccaagcgcgccttcgcc
aacatggaggtgatcccggcggggaacgggatcatgcatcagatcaacctggagaagatg
tcgccggtggtctacgtgcaggatggcctggcctttcccgacacctgcgtgggcaccgac
agccacacgccgcacgtcgatgcgctgggcgtgatcgcggtgggcgtcggcggcctcgaa
gccgagaacgtgatgctgggccgcgcctcgtggatgcgcctgcccgacatcgtcggcgtc
gagctgacaggccggcgccagccgggcatcaccgccaccgacatcgtgctggcgctcacc
gagttcctgcgcaaggaaaaggtggtcggcgcctacctggaatttttcggcgagggcacg
aagggcctcacgatcggcgaccgcgcgaccatctccaacatgtgccccgagtacggcgcc
acggccgcgctgttctacatcgacgaccagacgctcacgtacctgcgacttaccggccgt
gaagatgcgcaggtcgcgctggtcgagacctatgcgaagaccgccggcttctggggcgat
gcgctgaagaccgcgagctacgagcgcgtgctgaagttcgacctgtcgagcgtcgtgcgc
aacatggccgggccttccaacccgcaccgccgcctgccgacctcgcaactggccgagcgc
gacatcgccgtcggattggccgaagcccggcagcaggaggctgcgggcctgatgcccgat
ggcgccgtcgtcatcgcggccatcacctcgtgcaccaacacctcgaacccgcgcaacgtg
atcgccgcgggcctgctggcgcgcaacgcgaaccgcttgggcctcaaacgcaagccgtgg
gtcaagtcgtcactggcaccgggctcgaaaacggtggagctctacctgcgcgacgccggg
ctgttgaccgacctggagcaactgggcttcggcatcgtcgccttcgcctgcaccacctgc
aacggcatgtcgggcgcgctggacccgaagatccagcaggagatcatcgagcgcgacctg
tacgctaccgcggtgctctcgggcaaccgcaacttcgacggccgcatccatccgtatgcg
aagcaggccttcctggcctcgccgccgctggtggtcgcctatgccatcgcgggcacgatg
cgcttcgacatcgagcgcgacgtgctggacgtggtcgacggcaaggagattcgcctggcc
gacctgtggccgagcgacgaggaaatcgacgctatcgttgcggcctcggtgcggcccgag
atgttccgcaaggtgtacgagcccatgttcgcgatccacgcggacaacggcgagaaggtg
agcccgcagtacgactggcggccgcaatcgacctacatccgccgcccgccgtactgggac
agcgaaggcgtgggcgcgctcgctgccgtgccgcgcacgctgcgcggcatgcggccattg
gccatcctgccggacaacatcacgaccgatcacctgtcgccctccaacgcgatcctgctg
gacagcgccgccggcgagtacctggcgaagatgggcctgccggaagaagacttcaattcc
tacgccacgcaccgcggcgaccacctgacagccatgcgcgctaccttcgcgaacccgcag
ctcgtcaacgagatggcggtggagggcggtgtgcagaagaagggatcgctcgcgcgcatc
gagcccgaaggcaaggtcgtgcgcatgtgggaggccatcgagacctacctggaccggagg
caaccgctcatcatcgtggccggcgccgactacggccaggggtcgtcgcgcgactgggcc
gccaagggcgtgcggctggccggcgtggagactgtcgtggccgagggcttcgagcgcatc
caccgcaccaacctgctcggcatgggcgtgatgccgctggagttcaagcccggcaccacg
cgcctcacgctgggcctggacggcaccgagacctacgacgtggtcggcgagcccaggccc
cacgccgacctcacgctggtcgtgcaccgcaagaacggcgaggtcctgcaggtgccggtc
acctgccggctcgacacggccgaagaggtgtctatctacgaggcgggcggcgtgctgcag
cgttttgcgcaagacttcctggccgagaacaaactcgccgcctga
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