Variovorax paradoxus EPS: Varpa_4955
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Entry
Varpa_4955 CDS
T01392
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
Organism
vpe
Variovorax paradoxus EPS
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ADU39115
UniProt:
E6V236
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Position
complement(5380811..5382073)
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AA seq
420 aa
AA seq
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MATVFPIKPAQPTGAPQANDVLHWMRPGPLQLAALPPLSLYIHLPWCLRKCPYCDFNSHE
WRATSAADAEGIPEAAYIDALVADLDAALPLIWGRTVHTIFIGGGTPSLFSPQAIDRLLG
DVRARLKLAPDCEITLEANPGTFERNRFRAYRSAGVTRLSVGVQSFNDEHLTALGRVHDR
AQAIAAVEEAASAFDTFNLDLMYALPGQTLEHLEADLSQALALAPPHISVYHLTIEPNTW
FAKFPPTLPEDDIAYAMLDRITERTGEQGMSRYEVSAYAREGHQCAHNLNYWQFGDYLGI
GAGAHSKLSFAHRIVRQVRYREPRLYMENARAGAAVSQSDEVSLADLPFEFMLNALRLKA
GFTLPQFSERTGLAMTSIQRGLEEAERKGLVARDLFRVWPTERGLDFLSDLQTLFLPDGD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgttttcccgatcaagccggcgcagcccaccggcgcgccgcaggccaacgac
gtgctgcactggatgcggcccggtccgctgcagctcgcggcgttgccgccgctgtcgctc
tacatccatctgccgtggtgcctgcgaaagtgtccgtactgcgacttcaattcgcacgaa
tggcgtgcgacgagcgcggccgatgcggagggcatccccgaggcggcgtacatcgatgcg
ctcgtggccgacctcgatgccgcattgccgctgatctggggccgcactgtccacaccatc
ttcatcggcggcggcacgcccagcctcttctcgccgcaggccatcgaccgcttgctcggc
gacgtgcgcgcgcgcctgaagcttgcacccgattgcgagatcacgctcgaggcgaacccc
ggcaccttcgagcgcaaccgcttccgcgcataccgctcggcgggcgtcacgcgcctgtcg
gtgggcgtgcagagcttcaacgacgagcacctgacggcgctcggccgcgtgcacgaccgc
gcccaggccatcgccgcggtggaagaggctgcgagcgccttcgacaccttcaatctcgac
ctgatgtatgcgctccccggccagacgctcgagcacctggaggccgacctgtcgcaggcc
ctcgcgctcgcgccgccgcacatttcggtctatcacctcaccatcgagcccaacacctgg
ttcgcgaaatttccgccgacgctgcctgaagacgacatcgcctacgcgatgctcgatcgc
atcaccgagcggaccggcgagcagggcatgtcgcgctacgaggtgtcggcctatgcgcgc
gaggggcaccagtgcgcgcacaacctcaattactggcagttcggcgattacctgggcatc
ggcgccggcgcgcacagcaagctgagctttgcgcaccgcatcgtgcggcaggtgcggtat
cgcgaaccgcggctgtacatggagaacgcgcgcgcgggcgcggcagtgtcgcagagcgac
gaggtgtcgctggccgatttgccgttcgagttcatgctcaatgcgctgcgattgaaggcg
gggttcacgctgccgcagttcagcgagcgcaccgggctcgcgatgacgtcgatccagcgc
gggctcgaagaggcggagcgcaaggggctcgtggcgcgcgacctgtttcgcgtgtggccg
accgagcgggggctggactttctgagcgatctgcagacgctgttcttgcccgatggggat
tga
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