Variovorax paradoxus EPS: Varpa_5407
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Entry
Varpa_5407 CDS
T01392
Name
(GenBank) inner-membrane translocator
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_5407
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_5407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5407
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_5407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ADU39562
UniProt:
E6V8D8
LinkDB
All DBs
Position
complement(5872375..5873619)
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AA seq
414 aa
AA seq
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MKTALLLVLAGVAALAALPFLLSQGLLNAAIQMLIAALFASAYNLLCGQAGMLSFGHAAY
FGVGAFGTVHAMNAIGGAGLLPTPLMPLAGAACGLVFGGIAGWFATKRTGTYFAMITLAI
AELVHSLAPHLKGLFGGEAGVSTMRMPAWGLDFGSTTQVYYLTLAWVLLSVLLLYLFTRT
PMGRLAYGLRENSHRLRFLGYNVHGLGMLVFAISAMFSGIAGGLQVVSNESANYVVFDPA
LSAAVVLNTYIGGVKVFLGPAFGAALMTFFGYAVSDLTQSWLLYQGILFVLVMMFMPSGL
AGLIGTTGRLRQSIGIARLVPLVLLSIAAAVLLSMGGAFAVEMLQRIFSQDYRAMAKLAA
GGAWPPVTLLARAWSPTAVATWAVPVVLIGAGALLAWVGQRHLKQATERAGGAA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggcgcttctcctcgtcctcgcgggcgtcgcggcgctcgccgcgctgcctttc
ctgctgtcgcaggggctgctgaacgcggccatccagatgctcatcgccgcgctgttcgcg
agcgcctacaacctgctgtgcgggcaggcgggcatgctgtccttcgggcacgctgcctat
ttcggtgtcggcgcgttcggcaccgtgcatgcgatgaacgccatcggcggcgcgggcctc
ctgcccacgcccctgatgccgctcgcgggcgccgcctgcggcctggtcttcggcggcatc
gccggctggttcgcgaccaagcgcaccggcacctacttcgcgatgatcacgctagccatc
gccgagctggtgcactcgctcgcgccacacctcaagggcctcttcggcggcgaggccggc
gtgtccaccatgcgcatgccggcatggggcctcgatttcggatcgaccacgcaggtgtac
tacctcacgctcgcgtgggtgctgctgtcggtgttgctgctgtacctgttcacgcgcacg
cccatgggccgtctcgcctacggcctccgcgaaaacagccaccggctgcgcttcctcggc
tacaacgtgcacggcctgggcatgctggtgttcgcgatctcggcgatgttctcgggcatc
gcgggcggcctgcaggtggtgtcgaacgaatcggcgaactacgtggtgttcgatccggcg
ctttcggccgccgtcgttctcaacacatacatcggcggcgtgaaggtgttcctcggtccc
gcgttcggcgcggcgctcatgaccttcttcggctacgccgtctccgacctcacgcagtcg
tggctgctctaccagggaatcctgttcgtgctcgtgatgatgttcatgccctcggggctc
gccggtctcatcggcaccaccgggcgactgcgccaaagcatcggcatcgcgcgcctcgtg
ccactggtgctgctgtccatcgccgcggcggtgctgctgagcatgggcggcgcgttcgcg
gtcgagatgctgcagcgcatcttctcgcaggactaccgcgcaatggccaagctcgccgcg
ggcggcgcttggccgccggtcacgctgctcgcgcgcgcctggtcgccgacggcagtggcg
acgtgggcggtgccggtggtgctcatcggtgcgggcgctttgctcgcgtgggtcgggcag
cggcacctcaagcaggccaccgagcgcgcgggaggtgccgcatga
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