KEGG   Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_15315
Entry
M634_15315        CDS       T02761                                 
Name
(GenBank) RNA polymerase sigma factor AlgU
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
Brite
KEGG Orthology (KO) [BR:vpf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vpf03021]
    M634_15315
Transcription machinery [BR:vpf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M634_15315
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_16 HTH_20
Other DBs
NCBI-ProteinID: AGQ91728
LinkDB
Position
I:complement(3188539..3189117)
AA seq 192 aa
MNEQLTDQVLIERVQNGDKQAFNLLVTKYQNKVCNLISRYVSNPGDVPDVAQEAFIKAYR
AIPSFRGESAFYTWLYRIAVNTAKNHIVAQGRRPPATDVDAEEAEFYETGSALKEISNPE
NLTLSKELQRVVFSAIEALPEDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRARE
AVEKKIRPLLQR
NT seq 579 nt   +upstreamnt  +downstreamnt
atgaacgagcagctgaccgatcaagtattgattgagcgagttcagaatggtgataagcaa
gcattcaacctactggtaacaaagtatcagaacaaggtgtgtaatcttatttccagatac
gttagtaatcctggcgatgtaccagatgtagcacaagaagcctttatcaaagcttaccga
gctatccctagctttcgcggggaaagtgcgttttatacgtggctgtatcgcattgcagtg
aatactgcgaaaaatcacattgtggctcaagggcgcagacccccagcgacggatgttgat
gctgaagaagctgaattttacgaaacaggtagtgcacttaaagaaatttcgaaccctgag
aacttaacgttgtccaaagaactgcaacgggtagtgttcagtgcaatcgaagctttacct
gaagatttaaagacagcaatgacattgcgagagctcgatggcttaagttatgaagaaatt
gctgaagtaatggattgcccggtaggaacggtacgttcacgtatcttccgtgctcgtgaa
gcggtggaaaagaaaatcagacctcttttacagcgctag

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