Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_15315
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Entry
M634_15315 CDS
T02761
Name
(GenBank) RNA polymerase sigma factor AlgU
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpf03021
]
M634_15315
Transcription machinery [BR:
vpf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M634_15315
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AGQ91728
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All DBs
Position
I:complement(3188539..3189117)
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AA seq
192 aa
AA seq
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MNEQLTDQVLIERVQNGDKQAFNLLVTKYQNKVCNLISRYVSNPGDVPDVAQEAFIKAYR
AIPSFRGESAFYTWLYRIAVNTAKNHIVAQGRRPPATDVDAEEAEFYETGSALKEISNPE
NLTLSKELQRVVFSAIEALPEDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRARE
AVEKKIRPLLQR
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagctgaccgatcaagtattgattgagcgagttcagaatggtgataagcaa
gcattcaacctactggtaacaaagtatcagaacaaggtgtgtaatcttatttccagatac
gttagtaatcctggcgatgtaccagatgtagcacaagaagcctttatcaaagcttaccga
gctatccctagctttcgcggggaaagtgcgttttatacgtggctgtatcgcattgcagtg
aatactgcgaaaaatcacattgtggctcaagggcgcagacccccagcgacggatgttgat
gctgaagaagctgaattttacgaaacaggtagtgcacttaaagaaatttcgaaccctgag
aacttaacgttgtccaaagaactgcaacgggtagtgttcagtgcaatcgaagctttacct
gaagatttaaagacagcaatgacattgcgagagctcgatggcttaagttatgaagaaatt
gctgaagtaatggattgcccggtaggaacggtacgttcacgtatcttccgtgctcgtgaa
gcggtggaaaagaaaatcagacctcttttacagcgctag
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