Vagococcus penaei: BW732_00930
Help
Entry
BW732_00930 CDS
T04715
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
vpi
Vagococcus penaei
Pathway
vpi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vpi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BW732_00930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpi03021
]
BW732_00930
Transcription machinery [BR:
vpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BW732_00930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AQP52928
UniProt:
A0A1Q2D3L4
LinkDB
All DBs
Position
complement(196114..197247)
Genome browser
AA seq
377 aa
AA seq
DB search
MGIEGVNNQVTYKKTVEAFIRQNKAKGQVFYNELTDTIATPYELDADQMDVLIQKVEDAG
ISVVDENGEPSEHSIRVLKKNEEKTDEKEKEKEEDLIAPAGVKINDPVRMYLKEIGRVPL
LKADEEVTLALRIKEGDPEAKQELAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKA
VEKFDHEKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLG
REPTPEEIGAEMELSPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPADHA
AYELLKEQLESVLDTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKAL
RKLRHPSRSKQLKDFLE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggtattgaaggagtaaataaccaggtaacttacaaaaaaacggttgaggcctttatt
cgacaaaacaaagctaaagggcaagtgttttataatgagttaacagatactattgctact
ccttatgaattagacgcagaccaaatggatgtattaattcaaaaagttgaggatgcaggt
atcagtgttgttgatgaaaatggtgagcctagtgaacatagtatccgtgtattaaagaaa
aacgaagaaaaaacggatgaaaaggaaaaggaaaaagaagaagatttaattgcaccagct
ggggttaaaattaatgatccagtccgtatgtacttaaaagaaatcggccgtgtcccatta
ttaaaagctgatgaagaagtaactttagcgctacgtattaaagaaggcgatccagaagct
aaacaagaattagccgaggctaacttacgtttagtggttagtattgctaaacggtatgta
ggtcgtggtatgcagttccttgacttaattcaagaaggtaatatgggtttaatgaaagct
gttgaaaaattcgaccatgaaaaaggctttaaattttcaacttatgcaacatggtggatt
cgtcaagcaatcactcgtgctatcgctgaccaagctagaacaattcgtattcctgttcat
atggttgaaactatcaataaattgattcgcattcaacgtcaattgttacaagatttaggg
cgcgaaccaacacctgaagaaatcggagctgaaatggaattatcacctgaaaaagtacgt
gagattcttaaaattgcacaagagccagtttctttagaaacaccaattggtgaagaagat
gattctcatttaggagactttattgaagatcaagaggcaactagtcctgctgatcatgcg
gcttacgaattacttaaagaacaactagaaagtgtcttagatactttaacggaccgagaa
gaaaatgttctacgtttacgttttggtttagatgatggccgtactcggacgttagaagaa
gttggtcgtgtctttggtgtgacacgtgaacgtattcgtcaaattgaagcaaaagcatta
agaaaattacgccatccatcacgctctaaacaattaaaagactttttagaataa
DBGET
integrated database retrieval system
