Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_04315
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Entry
M636_04315 CDS
T02760
Name
(GenBank) nitrite reductase subunit NirD
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00910
Nitrogen metabolism
vpk01100
Metabolic pathways
vpk01120
Microbial metabolism in diverse environments
Module
vpk_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
M636_04315
Enzymes [BR:
vpk01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
M636_04315
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer2_BFD
NIR_SIR
Pyr_redox
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox_3
FAD_binding_2
GIDA
NAD_binding_7
AlaDh_PNT_C
Sacchrp_dh_NADP
FAD_binding_3
Pyr_redox_dim
Motif
Other DBs
NCBI-ProteinID:
AGQ96544
LinkDB
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Position
II:complement(946442..949006)
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AA seq
854 aa
AA seq
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MSKLKLVVIGNGMVGHRYIEDLVEKTDVSQMDITVFCEEPRVAYDRVHLSSYFSHHTADE
LSLVKEGFYEKHDINMLIGERAININRENRIVYSSTGREVQYDKLILATGSFPFVPPIKG
HESKDCFVYRTIEDLKAIEACAKKSKSGVVIGGGLLGLEAAGALKALGVETHVVEFAPKL
MAEQLDLAGGNQLRQKIERMGVNVHTSKNTLEIAAEGKNARNVMRFADGTELETDFIVFS
AGIRPQDKLARQMELELGPRGGVAINDHCQTSDENIYAIGECASWNEMFYGLVAPGYKMA
TVAVDHLLGNTESKFEGADMSAKLKLLGVKVGSIGDANGRTEGCKSYVYQNEEQEVYKRL
IVSEDNKKLLGAVLVGDTSDYGDLLQLMLNEIDLPEHPDALILPAHAGAEKPALGADALP
ESAVICSCFDVTKGKIAQAVADGHHTLGDIKAVTGAGTGCGGCIPLVTSVLNAELAKSGI
EVKNDVCEHFAYSRQELFHLIRIEEIKTFDELLEKYGKGYGCEVCKPLAGSILASCWGEH
ILKPQLVKLHDTNDNFLGNIQKDGTYSVIPRMAGGEVTPQALGALANVAAEYNLYTKVTG
AQRIGLFGAQKDDLPEIWRKLIDAGFETGQAYAKALRMAKTCVGSTWCRYGVQDSVGLGS
YIENRYKGIRTPHKMKFGVSGCTRECAEAQGKDLGIIATDAGWNMYVCGNGGMKPRHADL
LASDLDKETLIKYIDRFMMFYIRTAAPLQRTSVWMENMEGGVDYLRDVIVNDKLGINAQL
EADVAKLVDEYECEWTATINDESQLTRFAHFINSDKRDDNVVFVQEREQHRPATFTEKHP
EAKGDILHVAITEA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagttgaagctagtagttatcggtaacggtatggtagggcaccgttacatcgaa
gacttagtcgagaaaacggatgtctcgcaaatggatatcaccgttttctgtgaagaacct
cgtgtcgcatacgaccgtgtgcacctttcctcttacttttctcaccacacagctgacgaa
ctgtctctagttaaagaaggcttttacgagaaacatgacatcaatatgttgatcggtgaa
cgcgcgattaacatcaaccgtgaaaaccgaatcgtttactcaagcactggtcgtgaagtt
caatacgacaaactgattcttgctactggctcattcccatttgttccgcctatcaaaggt
catgaaagcaaagactgttttgtttaccgcacaatcgaagatcttaaagcgatcgaagcg
tgcgcgaagaagagtaaatcaggcgtggttatcggtggtggtctgctaggtcttgaagct
gcaggcgcactaaaggcactcggtgtagaaacacacgtcgttgagttcgcgccaaagcta
atggctgagcaacttgaccttgctggtggtaatcaacttcgtcaaaaaatcgagcgtatg
ggcgtgaacgttcataccagcaaaaacacgctagagattgcagcagaaggtaaaaatgct
cgtaacgtcatgcgttttgctgacggcactgagttagagacagacttcatcgtattttct
gcgggtattcgtccacaagacaaactggctcgccaaatggagctagaacttggccctcgt
ggcggtgttgccatcaacgaccactgccagacttctgatgagaacatctacgcgattggt
gagtgtgcgtcttggaatgaaatgttctacggccttgttgctcctggttacaagatggcg
accgttgcggttgatcacctactaggtaacacagaaagcaaattcgaaggcgctgatatg
tctgcgaagctaaaactgcttggtgtgaaagtgggctcgattggtgatgcgaatggccgt
acagaaggttgtaagagctacgtttatcaaaacgaagagcaagaagtttacaaacgtctt
atcgtttctgaagacaacaagaaactgctcggtgcggtattggtgggtgatacgtctgac
tacggcgatctgcttcaactgatgttgaacgaaatcgacctaccagagcatccagatgcc
ttgatccttcctgcacacgcaggtgctgagaaaccagcactcggtgcggatgcactacca
gaaagcgcagtgatctgttcatgtttcgacgtaaccaaaggcaagatcgctcaagcggtt
gctgatggtcaccacacattgggtgacatcaaagcagtgactggcgcaggtacaggctgt
ggtggttgtattcctctagtcacttctgttctaaatgcagagcttgctaaatcgggtatc
gaagtgaagaacgacgtgtgtgagcactttgcatactcacgccaagagttgttccaccta
atccgcattgaagagatcaaaacgtttgatgagcttctagagaaatacggtaaaggttac
ggctgtgaagtttgtaaaccactggcaggctccatcttagcttcttgctggggtgagcac
atccttaagccacaactggttaagctgcacgacacaaacgataacttcctaggtaacatc
caaaaagacggtacttactctgttatcccacgtatggcgggtggtgaagtaacacctcaa
gcactaggtgcgctagcaaacgttgctgcagaatacaacctatacactaaagtcactggc
gctcagcgtattggtctgtttggtgctcaaaaagacgatcttccagagatctggcgcaag
cttatcgacgctggtttcgaaacaggtcaagcgtacgcaaaagcacttcgtatggcgaag
acatgtgttggctcaacttggtgtcgttacggcgttcaagattctgttggcctaggttct
tacatcgagaaccgttacaaaggcattcgtacgcctcataagatgaagttcggtgtttct
ggctgtactcgtgagtgtgcggaagcacaaggtaaagaccttggtatcatcgcgactgac
gcaggttggaacatgtacgtatgtggtaacggcggtatgaaacctcgtcacgcagactta
ctagccagcgatctagataaagaaacgctaatcaagtacatcgaccgcttcatgatgttc
tacatccgtactgctgcgccactacaacgcacatcagtttggatggaaaacatggaaggt
ggtgttgactacctacgcgacgtgatcgtgaatgacaaacttggcatcaacgctcaatta
gaagcagacgtagcgaagcttgtagacgagtacgagtgtgagtggacggcaactatcaat
gacgaatcacaactgactcgtttcgcacatttcatcaactctgacaagcgcgatgacaac
gttgtgtttgttcaagagcgcgaacagcaccgcccagcgaccttcacggagaaacatcct
gaagcgaaaggcgacatcctacacgtagcgatcactgaagcataa
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