Vigna radiata (mung bean): 106765355
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Entry
106765355 CDS
T04126
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03022
Basal transcription factors
vra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106765355
09124 Replication and repair
03420 Nucleotide excision repair
106765355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vra03021
]
106765355
03400 DNA repair and recombination proteins [BR:
vra03400
]
106765355
Transcription machinery [BR:
vra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106765355
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106765355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
MetRS-N
Motif
Other DBs
NCBI-GeneID:
106765355
NCBI-ProteinID:
XP_014505423
UniProt:
A0A1S3UHB6
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All DBs
Position
6:36679010..36684633
Genome browser
AA seq
451 aa
AA seq
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MPEVRIIAKNFMDMVASMPAMKLDKLYENGFICEAILRSLPPLAKKYVIQMLQIDVPVAA
KLLEEWVLPDGLSKHRVAIDRLVQLRVFLEAVDRKNEKTYKVNPTYQRSLQKLLVQGGTL
PRESMPSNITVRLPTLENLEAYALEQWECFLLQLISPSQVDKPLNISSSLMKLFQRRLLS
HRDKEAPKLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDAADLISFMLELSFHVIGE
AYSINTLTDFQRSIINDLADLGLVKLQQGRKGSWFIPTKLATNLSMSLADSSSRKQGFVV
VETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNAFENGITADQIVTFL
QQNAHPRVAERIPSVPENVTDQIRLWEADLNRVEMTDAYYYDEFPSRDVFEGACDCAREW
NGLLWEDSKKMHMVVKTEVHPYVRDYLRRQK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggttaggattattgccaaaaatttcatggacatggtggcttccatgcccgcc
atgaagctggataaactttatgaaaatggattcatctgtgaggctattctcaggtctctt
ccgcctcttgcgaagaaatacgtcatacagatgctacaaattgatgtaccagtggcagct
aaattgttggaggagtgggtgcttccggatggactttcaaagcacagagtagccattgat
agactggttcagttgagagttttccttgaagctgttgacaggaagaatgaaaagacatac
aaagttaatccaacatatcagagaagtctccaaaagcttttagtacaaggtggaactttg
ccaagggaatcaatgccttccaatattactgtgaggcttccaaccttagaaaatctcgag
gcttatgctctagagcaatgggagtgtttcttattgcaacttataagcccaagtcaggtt
gataagcctttaaatattagctcttctttgatgaaacttttccagagacgtctccttagt
cacagagacaaagaagctccaaaactaactgaaagtggtttccagtttttgctgatggat
acaaatgcacagctttggtatatcatcagagaatatatctctaattctgaggagagaggt
gttgatgcagctgacttgatctcattcatgctggaacttagctttcatgtcatcggggag
gcatatagtataaacacattgactgattttcagaggagcataattaatgacctggcagac
cttggactggtcaaacttcagcagggaaggaaaggaagttggtttatacctacaaaattg
gcaaccaatctttcaatgagcttggctgattcatcgtctagaaaacagggatttgtggtt
gtggaaacaaattttagagtttatgcttactcgacttctaagttacattgtgagatattg
cggctattctcaagggtagagtatcaacttccaaatcttattgttggagctattacaaaa
gaaagcttgtataatgcttttgaaaatggcattacagcagatcagatagtcactttcctt
cagcaaaatgctcatcctcgtgttgcagagagaataccatcggtgcctgaaaatgtcaca
gatcagattaggctgtgggaagcagatctaaacagagttgagatgacagatgcatattac
tacgatgagttcccttccagagatgtatttgaaggtgcatgtgactgtgccagagaatgg
aatggtttgttgtgggaagattcaaagaaaatgcatatggtggttaagactgaggtacat
ccatacgtacgagattatttacgccgccaaaagtag
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