Aliivibrio salmonicida: VSAL_I0180
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Entry
VSAL_I0180 CDS
T00782
Symbol
rmlB
Name
(GenBank) dTDP-D-glucose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00521
Streptomycin biosynthesis
vsa00523
Polyketide sugar unit biosynthesis
vsa00525
Acarbose and validamycin biosynthesis
vsa00541
O-Antigen nucleotide sugar biosynthesis
vsa01100
Metabolic pathways
vsa01110
Biosynthesis of secondary metabolites
vsa01250
Biosynthesis of nucleotide sugars
Module
vsa_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VSAL_I0180 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VSAL_I0180 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
VSAL_I0180 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VSAL_I0180 (rmlB)
00525 Acarbose and validamycin biosynthesis
VSAL_I0180 (rmlB)
Enzymes [BR:
vsa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
VSAL_I0180 (rmlB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
CAQ77865
UniProt:
B6EPD7
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All DBs
Position
1:complement(220081..221172)
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AA seq
363 aa
AA seq
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MNILVTGGAGFIGSAVIRHIISNTSNSVINVDSLTYAGNLESLSQVEASDRYSFEHVDIC
NRTELDRIFSEYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEATRAYWNLLAD
DKKQAFRFHHISTDEVYGDLEGTDDLFTETTPYEPSSPYSASKASSDHLVRAWQRTYGLP
TVITNCSNNYGPYHFPEKLIPLMILNALEGKYLPVYGNGMQIRDWLFVEDHARALYKVVT
EGEIGETYNIGGHNEKANIEVVKTICSLLEELVPNKPEGVAQYLDLITYVTDRPGHDVRY
AIDASKIEHELGWKPEESFESGIRKTVQWYLDNKQWWSRVLDGSYAGERLGVSSEQVVHK
EIR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttagtcaccggcggcgcaggttttattggctcagcagttattcgccacatt
atcagcaatacatcaaactctgtcatcaatgttgattctcttacctacgcaggaaatcta
gagtctttgagtcaggttgaagcatcagatcgttattcatttgaacacgttgatatctgt
aatcgcactgaacttgaccgtattttttctgaatatcaacctgatgcagtcatgcaccta
gctgctgagtcacatgtagatcgctcaatagatggccctgctgcgttcattgaaactaat
attgtcggtacttatactttacttgaagcaacgcgtgcctattggaatttgttagctgat
gataaaaagcaagcctttcgttttcaccatatatcaacggatgaagtgtatggtgattta
gaaggtacagatgatttgtttaccgaaacaaccccttatgagccatcaagcccttattcc
gcgtctaaagcttcttcagatcatttagttcgtgcatggcaacgtacttatggcctacca
acagttattactaattgttcaaataactatgggccatatcatttccctgaaaagctgatc
ccattaatgattttaaatgccttagaaggtaagtatttacctgtttatggcaatggaatg
caaattcgagactggttgtttgtagaagaccatgctcgcgcgctatataaagtcgttact
gaaggtgagattggcgaaacctacaatattggtggtcataacgaaaaagccaatattgaa
gtagttaagaccatttgctcattacttgaagagttagtgccgaacaaacctgaaggtgtt
gctcagtaccttgatttaattacctacgtaacagaccgccctggtcatgatgttcgttat
gctattgatgcttcaaaaattgagcatgaattagggtggaaaccagaagagagctttgaa
tcagggatccgaaaaaccgttcaatggtatttagacaataaacaatggtggtcacgcgtc
cttgatgggtcttatgcaggagaacgtttaggcgtatcaagtgaacaggttgtacataag
gaaattagataa
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