Aliivibrio salmonicida: VSAL_I1950
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Entry
VSAL_I1950 CDS
T00782
Symbol
oppF
Name
(GenBank) oligopeptide transport ATP-binding protein F
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa01501
beta-Lactam resistance
vsa02010
ABC transporters
vsa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSAL_I1950 (oppF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSAL_I1950 (oppF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VSAL_I1950 (oppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsa02000
]
VSAL_I1950 (oppF)
Transporters [BR:
vsa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
VSAL_I1950 (oppF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
TniB
AAA_22
nSTAND1
AAA_13
RsgA_GTPase
PRK
AAA_29
NACHT
nSTAND3
AAA_16
AAA
AAA_5
RNA_helicase
DUF5906
NB-ARC
ATPase_2
Sigma54_activat
ATPase
Motif
Other DBs
NCBI-ProteinID:
CAQ79635
UniProt:
B6EH53
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All DBs
Position
1:2087013..2088005
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AA seq
330 aa
AA seq
DB search
MSADKKLLLEVKNLKVHFSIASKSVWPWVKPANLKAVDGVNVRLYEGETLGVVGESGCGK
STFARAIIGLVEATEGEVLWLGQDLTKLDDEPLRQKRKEIQMIFQDPLASLNPRMTVGDI
IAEPLQTFYPKLTKEEVKDRVKEMMMKVGLLPNVINRYPHEFSGGQCQRIGIARALILKP
KMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNE
VELGESDALFSDPKHPYTKALMSAVPIPDPKLERAKVIDMLEGDLPSPINPPSGCVFRTR
CPQATEICAQTKPELKGTDVHAVSCLAVTS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagataaaaaacttcttttggaagtcaaaaacttaaaagttcattttagtatt
gcatctaaatcagtgtggccatgggtaaaaccagccaacttaaaagcggttgatggggtg
aatgttcgcttgtatgaaggtgagactctaggtgttgttggtgaatctggttgtggtaaa
tctacttttgctcgagcgattatcggtttagttgaagccaccgagggtgaagttctttgg
cttggtcaagatttgacgaagttggatgatgagcctttacgccaaaaacgaaaagagatt
caaatgatcttccaggatccgctggcgtctttgaatcctagaatgactgttggtgatatc
attgctgaacctctgcaaacgttttatcctaaacttacgaaagaagaggtgaaggatcga
gtaaaagagatgatgatgaaggttggtttgttaccaaacgtcattaaccgttatccacat
gaattctctggtggtcaatgtcagcgcatcggaattgcacgagccttgatacttaaacca
aaaatgatcatctgtgatgagccagtatcggcgcttgatgtttctattcaagctcaagtt
gttaacttacttaaagagttacaaaaagaattaggtttaagcttagtttttattgctcat
gacctttctgtggttaagcacatttctgatcgcgtacttgttatgtatttaggtaacgaa
gttgagttaggtgaatctgatgctttgtttagcgatcctaaacacccgtacacaaaagca
ttaatgtcagcggtaccaatcccagatcctaaacttgaaagagcaaaggtgattgatatg
ctagaaggggatcttccttctccaatcaatccgccatcagggtgcgtgtttagaacgcgt
tgcccacaagcaacggaaatatgtgcacaaacaaaacctgagcttaaaggcactgatgtt
catgctgtctcttgtttagcggtaactagctaa
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