Vibrio scophthalmi: VSVS12_00721
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Entry
VSVS12_00721 CDS
T04650
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00550
Peptidoglycan biosynthesis
vsc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VSVS12_00721 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vsc01002
]
VSVS12_00721 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsc01011
]
VSVS12_00721 (dacB)
Enzymes [BR:
vsc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VSVS12_00721 (dacB)
Peptidases and inhibitors [BR:
vsc01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
VSVS12_00721 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
vsc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
VSVS12_00721 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ANS84518
UniProt:
A0A1B1NL99
LinkDB
All DBs
Position
1:complement(776054..777481)
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AA seq
475 aa
AA seq
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MNVSLRTTLASFITLFSTFSLAYAPLDHLPQGSRVSIAIEPLNSNQPYLTTSNRDQFFPP
ASTLKVVTALAAKLALGDEFQFKTQLEANQRDMVIRFSGDPTLTSQDLKQLLTLARQQGI
TTIKGDLWLDNSAFSGYERAVGWPWDITGVCYSAPSSAITLDENCVQASIYANKDGSTRA
YTPEHFPIYLSTTAKTISKQRYEETHCDLELITTPDNHYQLSGCLVERSKPLPLKFAVQN
PSLYTQRTVHTLLNQLNIKLIGNVKVGSPEISNLKPIATHYSAKLPELLTVMLRKSDNLI
ADNVTKAIGQHYFSLPGSYNTGTEAIKQVISEKTGINIERNKIVDGSGLSRNNRFTSADM
TALLRYIWQHDDQLGLIALMPSAGENGTLKYRSSMRNDPIKGQLVAKSGSVYGSYNMAGF
GLNKQGQPTTLFVQYVADYLPTKRDNDTPTVAPITQFEQLFYQDVLKYSQASPKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtttcactgcgcacgacactcgccagcttcatcacactattttcaaccttttca
ctggcgtatgccccactcgaccatttaccgcaaggcagtcgagtttcaatcgcaattgaa
ccgctcaatagtaaccaaccttatctcacgacttctaatcgcgatcagttttttccacca
gccagtacgcttaaagtggtgaccgcattggctgccaaattggcattgggggatgagttt
caatttaagacccaattggaagcgaatcagcgtgatatggtgattcgctttagtggcgac
ccaaccctcaccagccaagacttaaaacaattattaaccttagcgcgtcaacaaggtatc
accaccatcaagggtgacctctggttagataacagtgcttttagcggctatgaacgcgcc
gttggttggccatgggatattaccggtgtttgctacagtgcgccttcatctgcgatcaca
ctcgatgaaaactgcgtccaagcttctatctacgcgaataaagatggttcaactcgtgct
tatactcctgagcacttcccgatttacttatcaaccacagcgaaaaccatctctaaacaa
cgctacgaagagacacactgcgatttagagctgataacgacaccagataaccactatcag
ctatcaggctgcttggtggaacgtagcaagccgctaccgctcaaatttgcggtacaaaac
ccaagcttgtacacccaaagaaccgtccacacactattgaaccaacttaatattaagtta
atcggtaatgtgaaagtgggctcgcctgagataagcaatctcaaaccaatcgcgactcat
tactcagctaaactgccagaactgctcactgtgatgctgagaaagtcagacaaccttatt
gcagataatgtaactaaagcgatcggccaacactacttcagcttgccgggcagttataac
acgggtaccgaagccatcaagcaagtgatcagcgagaaaaccggcatcaacattgagcgt
aataaaatcgtcgatggctcaggactatcacgcaacaaccgctttaccagtgccgatatg
acggcgctgttgcgttatatttggcagcacgacgatcagttaggattaatcgccttaatg
ccaagcgccggtgaaaacggcaccttaaagtaccgtagcagcatgcgtaatgacccaatc
aaaggccaattagttgccaaaagtggttctgtgtacggcagctataacatggcagggttt
ggattaaataagcaggggcaaccaaccaccttgtttgtacagtatgtggcggattatctc
ccaacaaaaagggacaacgatacaccgaccgttgcccctattactcaatttgaacagctg
ttctaccaagacgtgctcaaatacagtcaggcgagccctaagaagtaa
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