Vibrio scophthalmi: VSVS12_00788
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Entry
VSVS12_00788 CDS
T04650
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsc03009
]
VSVS12_00788 (rluD)
Enzymes [BR:
vsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VSVS12_00788 (rluD)
Ribosome biogenesis [BR:
vsc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VSVS12_00788 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
Motif
Other DBs
NCBI-ProteinID:
ANS84583
UniProt:
A0A1B1NLL6
LinkDB
All DBs
Position
1:851093..852070
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AA seq
325 aa
AA seq
DB search
MAQQIELTNTVKDSQLGQRLDQAIAEIFADFSRSRLKEWLLAGKVQVDGQVITKPRTRVM
GGEVIILQAELEDEERWEAQDIPLDIVYEDDDIIVMNKPRGFVVHPGAGTPDGTVLNALL
HHYPDIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRNITREYEAIAIGRMT
AGGKIEQPIGRHSTKRTLMAVSPMGKPAATHYRVAEHFREHTRIRLRLETGRTHQIRVHM
SYLQYPLLGDTAYGGRARIPSGASQELTEMIRQFDRQALHAVMLKFEHPVTGEELEFHAP
VPEDMVILTEALRQDAQEHGLEEEY
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagattgaattaactaatacagtaaaagatagccaattaggtcaacgactt
gatcaagctatcgccgaaatttttgccgacttctctcgttctcgtctaaaagaatggctt
ttagcgggtaaagtacaagtggatggtcaagtaattaccaaaccacgtactcgagtgatg
ggcggtgaagtcatcatcctgcaagcggaacttgaagatgaagagcgctgggaagcgcaa
gatattcctttggatatcgtctacgaagatgacgacattatcgtaatgaataaacctcgc
ggttttgtagtacacccaggtgcaggaactcctgatggtacagtgctaaatgcactgctt
catcattatcctgatatcgcggaagtaccacgtgcggggattgttcaccgtttggataaa
gacaccactggtcttatggttgtggcgaaaacggtgccagcacaaactcgtttagtgcgt
gcgctgcaaaaacgtaacattacgcgtgagtatgaagccattgcaattggccgtatgacg
gcgggcggtaagattgaacagccaattggccgtcactcaaccaaacgtacgttgatggcg
gtaagcccaatgggtaagccggcagcaactcactaccgtgttgcggagcacttccgcgaa
catacgcgtattcgtctgcgtctagaaacgggtcgtactcaccaaattcgtgtacacatg
tcatacctacagtatccgctacttggtgataccgcttacggcggtcgcgctcgcattcca
tctggagcgagccaagaattgacggagatgatccgccagtttgatcgtcaagcattgcat
gctgtgatgctgaagtttgaacacccagtaacgggtgaagaacttgagttccatgcgcca
gtgccagaagacatggtgattctgactgaagctctacgtcaagatgcacaagagcacggc
ttagaagaagagtactaa
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