Vibrio scophthalmi: VSVS12_02607
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Entry
VSVS12_02607 CDS
T04650
Name
(GenBank) Diguanylate cyclase VdcA
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VSVS12_02607
Enzymes [BR:
vsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VSVS12_02607
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ANS86363
UniProt:
A0A1B1NRR7
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All DBs
Position
1:2865269..2867311
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AA seq
680 aa
AA seq
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MPSQQFQDWFTQITAKSPFFSAILDDQHNYVMVNERYCEISGLSQKELVGRSDREILGEQ
FYYQLKPYYQRALLGESSETEITLNDVDLETSLLCSISPISFNNKVQYVVLHAIDTSEKS
ILIHSLEEAENKFSALTQLLPEGLLLVEHDCILSANPAAVRLLGFESSSDLLGEELSRLF
IDENSKKSFNNKLGMLLHDAPILCLTGPRCGLERKVQLQAAHAMIMGEESQLVLIQDAEQ
APKKISDSTINSDAHIDSLTGLYNRFGFTKRLDQLIKNETPLIMLYLDIDNFKNINDSLG
HHIGDKVIKEVSCRLKRLLPQQAVLGHLGGDEFGLILPNPENNRMVESLSDRIISLINQP
FDLQHFSKRLACSIGSVVYPGDGNDARILLQNADTAMYEAKERGRNRLIKFNDQMNKEAR
MRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAE
RAGLIEHLGRVVMREVFATVKRWKMQGILPGRVAINLSPEQFGNPKLIDYMEKLLRSTEL
DPSCITFELTESAVMSDSEHTLQMLNAIKKLGFALSIDDFGTGYSSLAYLARFPLDELKI
DRAFITEIDTLPKQVTVIENIINLGKSLNLTVVAEGVETQQQATLLSNLNCNSIQGFHFY
RPQPKQDVEELFMQNRRHKN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgcaacagtttcaggattggtttacacaaattacggctaagagtccttttttc
tcggccatcttagacgatcaacataactatgtgatggttaacgaacgctattgcgaaata
tcgggactatcacaaaaagagcttgtcgggcggagcgatcgtgaaattcttggtgagcag
ttttattaccagctcaaaccctactaccaacgtgctctacttggcgaatcaagtgaaact
gaaattacgcttaacgatgtcgacctcgaaaccagtctgctctgttccatctctccgatt
agcttcaataacaaagtgcaatacgtcgttcttcatgcgattgatacctctgaaaaaagc
attttaatccactcgctcgaagaagcagaaaacaagttttccgcactgactcaactgttg
cccgaagggttattgctcgttgaacatgattgtattttgtcagccaatcccgccgccgtt
cgcttacttggatttgaatcaagcagtgatttattaggtgaggagctgtcgcgcctgttt
atagatgaaaacagcaaaaagtccttcaataacaaactcggcatgctactgcatgatgca
ccgatcttgtgcctgacaggaccacgctgtggattagagcgaaaagttcagctacaggcc
gcacatgcgatgatcatgggcgaagaatcacaactggttctgatccaagatgctgaacaa
gcaccgaaaaaaatcagtgactccaccataaatagtgatgctcatattgattctttaacc
gggctatataaccgctttggtttcaccaagcgccttgatcagctgatcaaaaatgaaaca
ccgttaatcatgctctaccttgacatcgataactttaaaaacatcaatgactctttaggt
caccatatcggtgacaaggtcatcaaagaagtttcctgtcgactcaagcgcttattacct
caacaagctgtacttggccatttaggtggcgatgagtttggtttgatcttacccaatcca
gaaaacaaccgcatggttgaatcactttcagatcgaattatatcactcatcaaccagccg
tttgatttgcaacactttagcaaacgcctggcttgttcaattggtagcgttgtctaccca
ggtgatggcaacgatgcacgcatattgctgcaaaatgccgacactgccatgtatgaagcc
aaagagcgcggccgtaaccgtttgattaagtttaacgatcagatgaacaaagaagcgcgc
atgcgtttatggctggaaatcgagctacaaaaggcactgcaacaaaatggccttgaagtg
tggtaccaaccgaaagtcaacgcgcgtgatttcagtatcaacggcgcagaagcgctagta
cgttggaaacacccagttgaaggctacatcagcccaggcgcctttattccggtggctgaa
cgagctggattaattgagcacttaggtcgcgttgtcatgcgtgaagtttttgccacggtg
aaacgctggaagatgcaaggcatcttacctggacgtgtcgctattaacctctcgccagag
cagtttggtaacccgaaactgatcgattacatggaaaaactattgcgctccaccgagctg
gatcctagctgcatcacgtttgaattgaccgaaagtgcagtgatgagtgacagtgagcac
acccttcaaatgctcaatgccatcaaaaaacttggttttgccctatccattgatgacttt
ggtaccggctattcatctcttgcctacttagctcgcttccctctcgatgaacttaaaatc
gatcgcgcctttatcaccgagatcgacaccttacctaaacaggtaacggtgattgaaaat
atcatcaacttgggcaaatcactcaatttaaccgtagttgcagaaggggttgaaacccaa
caacaagcaacactactgtcaaacctcaactgtaactcaattcaaggcttccatttctat
cgtccgcaaccaaagcaagacgtcgaagaattgttcatgcagaaccgtcgccataaaaat
taa
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