Vibrio scophthalmi: VSVS12_03559
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Entry
VSVS12_03559 CDS
T04650
Name
(GenBank) Proteases secretion ATP-binding protein PrtD
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
vsc
Vibrio scophthalmi
Pathway
vsc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSVS12_03559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsc02000
]
VSVS12_03559
02044 Secretion system [BR:
vsc02044
]
VSVS12_03559
Transporters [BR:
vsc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
VSVS12_03559
Secretion system [BR:
vsc02044
]
Type I secretion system
Multiple protein transporter
VSVS12_03559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
RsgA_GTPase
nSTAND1
AAA_29
DUF5065
AAA_16
AAA_22
DUF87
DLIC
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ANS87268
UniProt:
A0A1B1NU73
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All DBs
Position
2:569173..570882
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AA seq
569 aa
AA seq
DB search
MSIDSAKALLSSNPFDAVRKEIWAAIAFSLGVNLLVLAVPVYSLQLFDRVMGSASVETMF
ALLAITLFLVSAQALLEYIRTLLMQRSALKLDAKLSGELLAKSIAESSKTNRIEKNALQN
LTTLRNFLVSPSTSSILDLPFTPLFLLLLFAFHPYIGVVALIGVVVFAGLAAVMMLGGRK
LTAQAQKTTAQVSMELNDYLRNAPTLKAMGMSENVGNSWRETNASVLHLQWLVNSRVGLL
LAISRYSRTLLQVAVLTCGVYLALQQQIGIGAVIASSILIGRVLSPFESAVSGWKTWYSA
FKAWQSLNHSVLENTHSQKTLLPEPKGDIQFSNVSLKFAHARKATIQNISFKLGAGNALA
VMGNSGSGKSTLASLLMGIQQPSMGEIMIDGASIEKWDLNQFGQYIGYLPQHVGLLAGTV
KQNICRFTEGDDEAVIRAAKLACIHEIIMSLPDGYETYIGEGGVLLSGGQKQRIGLARAI
YSNPRVLVLDEPNSNLDPEGETALAIVLQHCKEHQITVVMISHRPGFLRQMDWVIKLKDG
KVEKAGTCEQFLGLHVEPELSQSQASQTA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagattcagcaaaggctttgctgtcgagcaatccgttcgatgctgtccggaag
gaaatttgggcagcgatcgctttcagtttaggggttaatttgctcgtgctggcagtgcca
gtgtatagcttacagctttttgaccgggtgatgggcagtgccagtgttgaaactatgttt
gctttgctggccattacactctttttagtttcggctcaggcactacttgagtatattcgc
accttgttaatgcaacgctcagcattgaagttggacgcgaaattgagtggtgagctactg
gcaaaaagcattgcggaatcctcaaaaaccaaccgtatagaaaagaatgccttacaaaac
ctcaccacgttacgcaattttttggtgtcaccttctacgtcatctattcttgatttaccc
ttcactccgctgtttttattactactgtttgcgttccatccctacatcggcgttgtcgct
ctgattggcgtggtggtatttgcaggtttagctgctgtgatgatgttgggcggtagaaag
ttaactgctcaagcgcagaagaccaccgctcaggtcagcatggaactcaatgattattta
agaaatgcccccacattaaaagcgatgggaatgagtgagaatgttggtaattcatggcga
gaaaccaatgctagtgtgttgcatttacagtggttggtgaattctcgtgtgggactattg
ctagctatcagccgttattctagaaccttattgcaagtcgcagtgctgacctgtggagta
tatctggcactgcaacagcagataggcattggcgcggtgatagctagttcgatattgatt
ggacgcgttttaagcccgttcgaaagcgcggtgagcggctggaaaacatggtatagcgcg
ttcaaagcgtggcaaagcctaaatcatagtgtgttggaaaatacacactcccagaagaca
ttattaccagaaccgaaaggcgatattcagtttagcaatgtcagcctcaaatttgctcat
gcgcgtaaagcgacgattcaaaacatcagttttaagttaggggcggggaacgcgcttgca
gtgatgggcaattctggatctggaaaatcaaccttagccagtttgttaatgggcattcaa
caaccgagtatgggcgagatcatgattgatggtgccagcattgaaaagtgggatcttaat
cagtttggccagtacattggctatctacctcaacatgtcggtctactggcagggacggta
aaacaaaatatttgccgttttactgaaggagacgatgaagccgtaatacgagcggccaag
ttggcgtgcattcatgaaatcatcatgtcattgccggacggttacgaaacctatattgga
gagggcggtgttttactttccggcgggcaaaagcaaaggattggtctagcgagagccatt
tattccaacccaagagtattggtgctcgatgagcctaattcaaatttggatccagaaggt
gaaacggccttagcgattgtgctgcaacattgtaaagagcaccagatcactgtcgtgatg
attagtcaccgtccgggctttttacgtcaaatggactgggttatcaaactcaaagatggc
aaggtagaaaaagcgggtacctgcgagcaattcttggggctacatgttgagccagagttg
tcacagagccaagcaagtcaaacggcttaa
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