KEGG   Vibrio atlanticus: VS_2413
Entry
VS_2413           CDS       T00812                                 
Name
(GenBank) Riboflavin biosynthesis protein ribD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vsp  Vibrio atlanticus
Pathway
vsp00740  Riboflavin metabolism
vsp01100  Metabolic pathways
vsp01110  Biosynthesis of secondary metabolites
vsp01240  Biosynthesis of cofactors
vsp02024  Quorum sensing
Module
vsp_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    VS_2413
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VS_2413
Enzymes [BR:vsp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     VS_2413
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     VS_2413
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CAV19572
UniProt: B7VJA8
LinkDB
Position
1:complement(2582176..2583300)
AA seq 374 aa
MSNFTPLDFQMMSRAIKLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEAHAEVH
AMRMAGDKAKGAIAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKM
LRDACIEVEIGLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSP
EARRDVQNYRAKSGAVLSTSQTVIEDNASLNVRWTELPSSIKEHYAEDELRQPIRVILDR
QNQLYPELKLFQTPTSVLRVAETSADIEVETTDAGQLDLHDLMRQLPANHIDHIWVEAGA
TLAKSLIEAQLVDELILYLAPKLMGSDGRGLMGALGLTSMSDVIDLEIKDVRQVGVDIRI
VAKPIIAKQIITKP
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgtcaaactttactcccctagattttcaaatgatgtcacgtgctattaagttagccaaa
cgcggcatttacactactgcaccaaacccgaatgtgggttgtgtcatcgtgcaaaccgat
ggccagatcgttggcgaaggtttccatgccaaagctggcgaagctcatgccgaagtacac
gctatgagaatggcgggtgataaggcaaaaggtgcgatcgcttatgtcacgctagaacct
tgctcgcactatggtcgaacgccaccttgtgctgaaggtttgattaaggctcaagtagcc
aaagtgatttgtgccatgcaggacccaaacccaaaagttgcaggtcgtggtatcaaaatg
ctacgcgatgcgtgtattgaggttgaaatcggtttattagagcaagatgctctcgacttg
aaccctgcatttatcaagcgtatgcaaacgggcatgccattcgttcagttaaagatggcc
gctagccttgatgggcaaacggcattggaaaatggtcaaagccagtggatcacatcgcca
gaagcgcgtcgtgatgttcagaactaccgagcaaaatcaggcgctgtgctatcaaccagc
cagacggtgattgaagacaacgcgtcgttgaatgttcgctggactgagttaccaagcagt
atcaaagagcattacgctgaagacgagctgcgtcagccaattcgcgtaattcttgatcgc
caaaatcaactgtatcctgagctcaagttattccaaactccaacatcggtattgagagtc
gctgaaacctctgctgatattgaagtcgaaaccacagatgcaggtcagctcgatttacac
gatctaatgcgtcaattgccagcgaaccatattgatcatatttgggtcgaagcgggcgct
accttggcaaaaagcttgattgaagcgcagctagtggatgagctaatcctttatttagca
cctaaactaatgggcagtgacggacgaggtttgatgggcgcattaggactcacttcaatg
tctgatgtgattgacctagaaattaaagatgttcgacaggttggtgtggatattcgcatc
gtcgcgaaacctattatcgcgaaacaaataataacgaaaccatag

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