KEGG   Vibrio atlanticus: VS_II1255
Entry
VS_II1255         CDS       T00812                                 
Name
(GenBank) putative RNA polymerase sigma factor SigZ
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
vsp  Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vsp03021]
    VS_II1255
Transcription machinery [BR:vsp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VS_II1255
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF GerE HTH_24 HTH_28 HTH_23 Phage_antitermQ DUF2089 Herpes_MCP HTH_AsnC-type HTH_30
Other DBs
NCBI-ProteinID: CAV27254
UniProt: B7VT03
LinkDB
Position
2:1389133..1389693
AA seq 186 aa
MKLEQVWAEYQQALKSFLHSKVNNSADVDDLLQDILIKTYQNLDKVQDASSVKSWLFQLA
NHTIIDFYRKHARQQRDSQIDAEDLWFTDLDHNSEFKQKLSLCIEPFIQALPEQSSSLLL
AVDIKGQSQKEIAEAQNISYSTVKSRVQKSRGDLKNLFEECCNLSLDQQGNVIDCELKPD
NDCSKC
NT seq 561 nt   +upstreamnt  +downstreamnt
ttgaagctcgagcaagtctgggccgagtatcagcaagcattaaagtcattcctgcattca
aaggtcaacaattctgcggatgtagacgacttgctccaagatatcttgattaagacttat
cagaacttagataaggtacaagatgcgagcagcgtaaagtcgtggctattccaattagcc
aatcacacgatcatcgacttttaccgtaagcacgctcgacaacaacgtgatagccaaatt
gatgctgaagatctttggtttaccgatttagaccacaattctgagttcaagcagaagctt
tcattatgtattgaaccctttattcaggcgttaccagaacaaagttcatcattactgctt
gctgtcgacatcaaaggccaaagccagaaagagatcgcagaggctcaaaacatcagctac
tcaaccgttaagtctcgtgttcagaaaagccgcggggatcttaagaacttgtttgaagag
tgctgtaacctgtcacttgatcagcaaggcaatgtgattgactgcgagctcaaaccagac
aacgattgcagtaagtgctaa

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