Vibrio atlanticus: VS_II1255
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Entry
VS_II1255 CDS
T00812
Name
(GenBank) putative RNA polymerase sigma factor SigZ
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vsp03021
]
VS_II1255
Transcription machinery [BR:
vsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VS_II1255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_24
HTH_28
HTH_23
Phage_antitermQ
DUF2089
Herpes_MCP
HTH_AsnC-type
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CAV27254
UniProt:
B7VT03
LinkDB
All DBs
Position
2:1389133..1389693
Genome browser
AA seq
186 aa
AA seq
DB search
MKLEQVWAEYQQALKSFLHSKVNNSADVDDLLQDILIKTYQNLDKVQDASSVKSWLFQLA
NHTIIDFYRKHARQQRDSQIDAEDLWFTDLDHNSEFKQKLSLCIEPFIQALPEQSSSLLL
AVDIKGQSQKEIAEAQNISYSTVKSRVQKSRGDLKNLFEECCNLSLDQQGNVIDCELKPD
NDCSKC
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctcgagcaagtctgggccgagtatcagcaagcattaaagtcattcctgcattca
aaggtcaacaattctgcggatgtagacgacttgctccaagatatcttgattaagacttat
cagaacttagataaggtacaagatgcgagcagcgtaaagtcgtggctattccaattagcc
aatcacacgatcatcgacttttaccgtaagcacgctcgacaacaacgtgatagccaaatt
gatgctgaagatctttggtttaccgatttagaccacaattctgagttcaagcagaagctt
tcattatgtattgaaccctttattcaggcgttaccagaacaaagttcatcattactgctt
gctgtcgacatcaaaggccaaagccagaaagagatcgcagaggctcaaaacatcagctac
tcaaccgttaagtctcgtgttcagaaaagccgcggggatcttaagaacttgtttgaagag
tgctgtaacctgtcacttgatcagcaaggcaatgtgattgactgcgagctcaaaccagac
aacgattgcagtaagtgctaa
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